| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1619 |
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| Symbol | |
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| ID | 4081892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1699270 |
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| End bp | 1700259 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638009991 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_616665 |
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| Protein GI | 103487104 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.821163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCATA CCCCCAATCG CCGCGAAATC CTGGCCGGGG CCGCCGCGCT GTCCGCCGCC
CCTGCCCTGC TCCACGCCGC GACGCCCGCG GGCGACCCGT CGCTGAAAGG CCGCACCATA
CTGATCACCG GCTGTTCGAG CGGGTTTGGG CGCATCGGCG CGCTCCACTA TGCCCGGCTC
GGCGCGAAGG TCATCGCGAC GATGCGCGGG CTGCCGCGCC CCGAAGCCGA AAGCCTGGCG
GCCGAAGCCG CGAAGGATAA GCTCGACCTC GATATCGTCG AGATCGACGT GACGAGCGAT
GCGTCGGTTG CGAGCGGGAC TGCAAAGGCG CTCGCCATCG CGGGCGGGCG CATCGACACG
CTGGTCAACA ATGCCGGGAT CGGCATCACC GGGCCGGTCG AGGTGCAGGA TATGGAAGCG
ACGCAGCTCA TCTTCGACAC CAATGTTTTT GGCATCCAGC GCATGCTGCG CGCGCTGTTG
CCACAGATGC GCGCGGCGAA GGGCGGGCAG GTCTTCAACA TTTCGTCGCA GCTCGGGCGC
GTCATCGTGC CGGGTGGCGG CCATTATTCG GCGACCAAGT TCGCGGTCGA GGCGCTGTCC
GAGCAGATGG CCTATGAACT GGTGCCGCAT GGCATCGACG TGACGGTGAT CCAGCCGGGG
GGCTATCCGA CGAAGGTGTG GGTCAATCGC AACGCCTATA CCGGGGCATT AAAGGCGCGA
AGCGATGCGG CGCTGCTCGA CGCCTATGCG CCCTTCACGC GCGGCATGGG GACCGAGGAC
GGCAGCGGGC GCAGCGCCGA TCCCGCCGAC GTGCCGCGCG CGATTGCCGA GATCATGGCG
ATGCCCGCGG GCAAACGGCC GCTGCGCCGC GCGGTGCATC CGGGGACCAG GCCGCAGGAA
GCGATCAACC GCGTGTCGGC CGAGGTGCAG CTCGCGTGGC TGGGCGGGTC GCCGACGCTG
GGACCACTGG TCAAGGCGGT CCACGACTGA
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| Protein sequence | MPHTPNRREI LAGAAALSAA PALLHAATPA GDPSLKGRTI LITGCSSGFG RIGALHYARL
GAKVIATMRG LPRPEAESLA AEAAKDKLDL DIVEIDVTSD ASVASGTAKA LAIAGGRIDT
LVNNAGIGIT GPVEVQDMEA TQLIFDTNVF GIQRMLRALL PQMRAAKGGQ VFNISSQLGR
VIVPGGGHYS ATKFAVEALS EQMAYELVPH GIDVTVIQPG GYPTKVWVNR NAYTGALKAR
SDAALLDAYA PFTRGMGTED GSGRSADPAD VPRAIAEIMA MPAGKRPLRR AVHPGTRPQE
AINRVSAEVQ LAWLGGSPTL GPLVKAVHD
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