| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1617 |
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| Symbol | |
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| ID | 4081890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1697878 |
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| End bp | 1698516 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638009989 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_616663 |
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| Protein GI | 103487102 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.817906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC AGCTGACGCT GACGGCCGAG ACGCGCGAAC GCGGAGGCAA GGGAGCCTCG
CGTGAACTGC GTCGCAATGG CCGCGTCCCC GCCGTCGTCT ATGGCGGCAA GGAAGAACCC
CTGATGATCC ACGTCGAGGA AAAGCTGCTG ATGAAGCAGC TGATGACGGG TCACTTCATG
AACTCGGTCG TGATGATCGA GGTCGGCGGC AAGCAGATTC GCACGCTGCC CAAGGACGTC
GCTTTCCACC CGGTCAAGGA TCGCCCGATC CACGCCGACT TCCTGCGCAT CGCCAAGGAC
GCCACGGTTC AGGTTGCGGT GCCGGTCGTG TTCCAGAACG AAGAAAAGTC GCCGGGCCTG
AAGCGCGGCG GCGTGCTGAA CATTGTTCGT CACGAGCTGG AACTTGTCTG CGACGCGGAC
AATATCCCCG ACGAGATCGC AATCGACGTC ACCGGCTTCG ATATCGGCGA TTCGATCCAC
ATCAGCAATG TCACTCTGCC GAAGGGCGTC GAAAGCGCGA TCACCGACCG CGACTTCACC
ATCGCCACCA TCGTCGCCCC ATCGGCGCTC AAGTCGAGCG ACGGCGACAC GACAAAGGAT
GAAGGCGAAG ACGCTGCCGA AGGCGGCGAC GAAGCCTAA
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| Protein sequence | MSDQLTLTAE TRERGGKGAS RELRRNGRVP AVVYGGKEEP LMIHVEEKLL MKQLMTGHFM
NSVVMIEVGG KQIRTLPKDV AFHPVKDRPI HADFLRIAKD ATVQVAVPVV FQNEEKSPGL
KRGGVLNIVR HELELVCDAD NIPDEIAIDV TGFDIGDSIH ISNVTLPKGV ESAITDRDFT
IATIVAPSAL KSSDGDTTKD EGEDAAEGGD EA
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