Gene Sala_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1580 
Symbol 
ID4083017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1652398 
End bp1654647 
Gene Length2250 bp 
Protein Length749 aa 
Translation table11 
GC content59% 
IMG OID638009949 
ProductN-acylneuraminate-9-phosphate synthase 
Protein accessionYP_616626 
Protein GI103487065 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2089] Sialic acid synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCATTG AACGGAATAT TGCACCGCTG ATCGTCTTTG CCGAGGAAGA CATTGTTTCG 
GCGCTTCGCA AGATCAGCGT CAATCAGCGC GGCTTTGTCC TGTGTGTTTC GGCGTCGGGA
AAGCTTGAAG CCGTGCTGAC TGACGGCGAT GTGCGCCGTT GGCTGGTCGA CGGCGGCCAG
TTCGATTTCG GCGTCAGCGC GGCAATGGTC GCGAACAAGC AGTTTGTCGC TGCAAAGGAT
GGAGCCAGCG AGGACGAGCT GAACGATCTT TTTTCGGATC GGGTGACATT CGTTCCCATC
GTCGACGGGC AACGTCATCT GCGCGCCGTC GCCTTCAGGG GGCAGCCGGT GGTGCGGATC
GGCGACCGGG TGATAGGCCC GGAGAGTCCG GCCTACATTA TTGCCGAGAT CGGCAATAAT
CACAACGGCA GCATCGAACT CGCCAAGCGG CTGGTCGAGC TTGCCGTCGA GGCAGGCGCC
GACTGCGCAA AGTTCCAGAT GCGCGACATG TCGAGCCTGT ATCGCAATGA GGGCGATTCC
GATGACGCCA GCGCGGACCT CGGGGCGCAA TATACGCTGG ATCTCCTCTC GCGCTTTCAG
CTGCCCGTCG ATGAAATGTT CCAGGTGTTC GATTATTGCC ATGAACTGGG TATCCAGCCG
TTATGCACGC CCTGGGATGA AGCCAGTCTG GCCCGGCTGG AAGCCTATGA CATGCCGGCA
TACAAGCTGG CTTCGGCCGA TCTGACCAAT CACCCGTTGT TGAGCGCGAT GGCGCGAACG
GGAAAGACGC TGATCTGTTC GACCGGCATG TCGACCCAAG GCGAGATCGA AAACGCGATT
GCCGTCCTGA AGCGCCACAC GGCGCCCTAT GTTCTGCTGC ATTGCAATTC GACCTATCCG
GCGCCGTTCA AGGATATTAA TCTGGCCTAT ATCCGCAGGT TGGAGAAACT TTCGGGCGGG
GTTGTCGGAT ATTCGGGGCA CGAGCGGGGA TATTTCATTC CCGTGGCGGC CGTCGCGATG
GGGGCAAAGG TTATAGAGAA GCACTTTACC GTCGATCGGG GGATGGAAGG AAATGATCAT
CGGGTCAGCC TGCTGCCCGA CGAGTTCTCG GCGATGGTGC GCGCCATCCG CGAAGTCGAG
GAGGCCATGG GTTATGGTGG CGCGCGCGGC ATCACCCAGG GTGAAATGAT GAATCGCGAA
GTCCTGGCAA AGAGTCTGGT TGCCGCGCGG CCGATCCGGG CGGGGCAGCA GATTGCCGAC
GAGGACATCC AGATCCGCAG TCCGGGCCAG GGGCTGCAAC CCTATTTTCG TGCCGAGCTG
GTCGGACGGA TCGCAAAGCG GGATATGATA GAGGGAGATT TTTTCTTCCA GAGCGACCTC
GCGGACGCGG TCGCCAGCGC GCGTGATTAC CGGTTCGACC GCCCTTTCGG CGTGCCTGTG
CGCTACCATG ACCTGCAGAA GATGATCGGC GCCACCAATC TCGATCTTGT CGAGTTCCAT
CTGAGCTACA AGGACATGGA GCTGGATCCG GTCCGGATGC TGGACGGCGC AACGTTCGAT
ATTGCGCTCG TTGTGCATAG TCCCGAACTG TTTGCCGGCG ACCATATCAT GGATCTGTGT
TCGGAGGATG ATGTCTATCG CCAGCGTTCG ATCGACGAAT TGCAGCGCGT GATTGACATC
ACACGGACGC TGAAACCCCA TTTCACGAAA TCGGCTCGTC CGCCGATCAT CATCAACGCG
GGCGGATTTT CCGCGGACGG TCCGATTACC GCGGAACGGC GACCTGCGAT GTATGACCGC
ATCGCCGATG CCCTGTCGCG GCTCGACAAG GAAGGGGTGG AGATAATTCC GCAGACGATG
CCGCCCTATC CGTGGCATTT CGGTGGGCAG CGCTACCATA ACCTCTTCCT GTCCGCAGAG
GACATCGTGC GTTTCTGTTC GGAACATGGA TACCGGATTT GCCTCGACGT GTCGCATTCG
GCGCTGGCGG CGACGCATCT GAAGACCAGT TTTCAGGAAC TTCTGCGACA GGTTGGGCCG
TACACATGCC ATATGCATAT CGTTGATGCA GCGGGGGTCG ACGGCGAAGG CCTGCAGATC
GGCGATGGCA CGGTCGATTT CGCCATGGTC GCCGATGTCC TGCGCGAAAC GGCGCCCGAT
GCCAGCTTCA TTCCTGAGAT ATGGCAAGGG CACAAGGATG ACGGCGCAGG TTTCTGGCAG
GCGCTCGACC GTCTCGAACA ATGGTTCTGA
 
Protein sequence
MIIERNIAPL IVFAEEDIVS ALRKISVNQR GFVLCVSASG KLEAVLTDGD VRRWLVDGGQ 
FDFGVSAAMV ANKQFVAAKD GASEDELNDL FSDRVTFVPI VDGQRHLRAV AFRGQPVVRI
GDRVIGPESP AYIIAEIGNN HNGSIELAKR LVELAVEAGA DCAKFQMRDM SSLYRNEGDS
DDASADLGAQ YTLDLLSRFQ LPVDEMFQVF DYCHELGIQP LCTPWDEASL ARLEAYDMPA
YKLASADLTN HPLLSAMART GKTLICSTGM STQGEIENAI AVLKRHTAPY VLLHCNSTYP
APFKDINLAY IRRLEKLSGG VVGYSGHERG YFIPVAAVAM GAKVIEKHFT VDRGMEGNDH
RVSLLPDEFS AMVRAIREVE EAMGYGGARG ITQGEMMNRE VLAKSLVAAR PIRAGQQIAD
EDIQIRSPGQ GLQPYFRAEL VGRIAKRDMI EGDFFFQSDL ADAVASARDY RFDRPFGVPV
RYHDLQKMIG ATNLDLVEFH LSYKDMELDP VRMLDGATFD IALVVHSPEL FAGDHIMDLC
SEDDVYRQRS IDELQRVIDI TRTLKPHFTK SARPPIIINA GGFSADGPIT AERRPAMYDR
IADALSRLDK EGVEIIPQTM PPYPWHFGGQ RYHNLFLSAE DIVRFCSEHG YRICLDVSHS
ALAATHLKTS FQELLRQVGP YTCHMHIVDA AGVDGEGLQI GDGTVDFAMV ADVLRETAPD
ASFIPEIWQG HKDDGAGFWQ ALDRLEQWF