| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1542 |
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| Symbol | |
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| ID | 4082441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1609040 |
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| End bp | 1609774 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009910 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_616588 |
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| Protein GI | 103487027 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.407354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTACAA GGTCTGAAGA ACTGGCGGGG CAGATCGCGC TCGTCACCGG GGCAAGCCGT
GGTATCGGCG CCGCAATCGC CGAATCGCTG GCCGCACGCG GCGCGCATGT CGTGATCACC
GCCCGCACCG CCGGCGGGCT CGAGGAACTT GAGGACCGCA TCCACGCCGC AGGGGGCAGC
GCGACGATCG CGCCGCTTGA TCTGACCGAC GGCGACAGCA TCGCCCGCCT CGCCAGCGCG
ATGGCCGAAC GCTGGCAGCA TCTCGACATG CTCGTGCTCA ACGCCGCGAT GCTCGGTACG
CTCACCCCTG TCGCGGCGAT CGACGGCAAG GAATTCAACA GGACGCTGAC GCTCAACCTG
ATCGCGCAGC AGGCGCTGAT CGCCAATTTC GACCCGCTGC TTCGCCGTGC CGCGAACGGT
CGGCTGCTTG CCCTGTCCAC CAGCGTCGCG CGCACCCCGC GCGCCTATTG GGGCGCCTAT
GCCGCGTCGA AGGCCGCCTT CGAGGTGCTT GTTACCAGCT ATGGCGCGGA AATGCGCAAT
ATCTCCGGCG TTCGCACCGC CATTCTCGAT CCGGGCCCCA CGCGCACGCA GATGCGCGCG
CGCGCCTATC CCGGCGAAGA TCCGCAGAGC ATCAAGGAAC CAGCCGCGGT CGGCGAATAT
GTCGCCGACC TGATGGTGCA GGGCTTTGAC AGCACCGCCT TCCATGCTTT GCCCAAGGTG
ATGGAAAAAG CTTAA
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| Protein sequence | MVTRSEELAG QIALVTGASR GIGAAIAESL AARGAHVVIT ARTAGGLEEL EDRIHAAGGS
ATIAPLDLTD GDSIARLASA MAERWQHLDM LVLNAAMLGT LTPVAAIDGK EFNRTLTLNL
IAQQALIANF DPLLRRAANG RLLALSTSVA RTPRAYWGAY AASKAAFEVL VTSYGAEMRN
ISGVRTAILD PGPTRTQMRA RAYPGEDPQS IKEPAAVGEY VADLMVQGFD STAFHALPKV
MEKA
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