| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1534 |
|---|
| Symbol | |
|---|
| ID | 4082433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 1601227 |
|---|
| End bp | 1601679 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638009902 |
|---|
| Product | MaoC-like dehydratase |
|---|
| Protein accession | YP_616580 |
|---|
| Protein GI | 103487019 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2030] Acyl dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.734487 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGCC GCTATTTCGA CGAATGGACC ATTGGCGACG CGCTGACGCA TGACATCCGC
CGCACGGTGA CCGAGACCGA CAATCTGCTG TTCACCACGA TGACGCACAA TCCGCAGCCG
CTGCACCTCG ATATCGAGGC GGCGAAGGCG TCGGAGTTTG GCCAGATCCT CGTCAACGGC
ACCTTCACCT TCAGCCTGAT GGTCGGGCTG TCGGTCGGCG ACACGACATT GGGCACGCTC
GTCGCGAACC TTGGTTACGA CAAGCTTGTC ATGCCCAAAC CCGTGTTCAT CGGCGATACG
CTCTATGCGA CGAGCGAGGT GATCGGCCTC AAGGAGTCGA AATCGCGGCC GAATGCAGGT
ATCGTCACCT TCCTGCACCG GGCGATCAAT CAGCGGGGCG AAATCGTCTG TCAGTGTGAA
CGCTCCGCGC TCATCAAAAG GAAGGACGCC TGA
|
|---|
| Protein sequence | MAGRYFDEWT IGDALTHDIR RTVTETDNLL FTTMTHNPQP LHLDIEAAKA SEFGQILVNG
TFTFSLMVGL SVGDTTLGTL VANLGYDKLV MPKPVFIGDT LYATSEVIGL KESKSRPNAG
IVTFLHRAIN QRGEIVCQCE RSALIKRKDA
|
|---|
| |