| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1507 |
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| Symbol | |
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| ID | 4080020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1568940 |
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| End bp | 1570958 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638009874 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_616553 |
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| Protein GI | 103486992 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.944776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.265264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACG CCATCATCCC GCATCCCGCG CCCCCGACGC ACCCGATCTT CGGCAAGCTG
TCGGTCGACG CGATCCCGCT GCACGAGCCG ATCCTGGTCG CGACCTTCAT CGGCGTGGCG
ATCGGCGGTA TCGCCGTGCT CGCGCTGCTC ACCAGATATC GCCTGTGGGG CTATTTGTGG
AAGGAGTGGT TCACCACGGT CGACCACAAG CGCATCGGGA TCATGTACAT GATCCTGGGG
CTGATCATGT TCCTGCGCGG TTTTGCCGAC GCGATCATGA TGCGATTGCA GCAGGTGATG
GCGTTCGGCG GGTCCGAGGG CTATCTCAAC GCGCATCATT ATGACCAGGT GTTCACCGCG
CACGGCGTCA TCATGATCTT TTTCGTCGCA ATGCCGTTCA TCACCGGCCT GATGAACTAT
ATCGTGCCGC TCCAGATCGG CGCGCGCGAC GTCAGCTTTC CCTTCCTCAA CAATTTCAGC
TTCTGGATGA CGAGCGCGGG CGCGGCGCTG ACGATGATCT CGCTGTTCGT CGGCGAATAT
GCGCAGACCG GCTGGCTGGC CTATCCGCCC TTGTCGGGCA TCGCCTACAG CCCCAATGTC
GGGGTCGATT ATTATATCTG GGGGCTTCAG ATCGCCGGGG TTGGCACCAC GCTGTCGGGC
ATCAACCTGA TCGTCACCAT CCTGAAGCTG CGCGCGCCGG GCATGGGGCT GATGAAGATG
CCGGTCTTTA CCTGGACGTC GCTCTGCTCG AACATATTGA TCGTCGCGAG TTTCCCGATC
CTGACCGCGA CGCTCGCGCT GCTCAGCCTC GATCGCTACG CGGGGACCAA TTTCTTCACC
AACGATCTCG GCGGATCGCC GATGATGTAT GTGAACCTGA TCTGGATCTG GGGGCACCCG
GAGGTCTACA TCCTCATCCT GCCGCTGTTC GGCGTCTTTT CCGAAGTCAC CTCGACCTTC
TCGGGTAAAA GGCTCTTCGG CTATACGTCG ATGGTTTATG CGACGGTGTG CATCACGATC
CTGTCGTACA TCGTCTGGCT GCACCATTTC TTCACCATGG GGTCGGGCGC CAGCGTCAAC
AGCTTTTTCG GCATCACGAC GATGGTGATT TCGATCCCGA CGGGAGCCAA GCTCTTCAAC
TGGCTCTTCA CCATGTACCG CGGCCGCATT CGCTATGAAC TGCCGATGAT GTGGACGATC
GCCTTCATGC TGACCTTCGT CGTCGGCGGC ATGACCGGGG TGTTGCTCGC GGTGCCGCCC
GCCGACTTTG TGCTGCACAA TTCGCTGTTT CTGATCGCGC ATTTCCACAA TGTCATCATC
GGCGGCGTGT TGTTCGGTCT GTTCGCGGCG ATCAATTACT GGTGGCCCAA GGCGTTCGGG
TTCAAGCTCG ATGTGTTCTG GGGCAAGGTC AGCTTCTGGT GCTGGGTCGT CGGTTTCTGG
GTCGCCTTTA CCCCGCTCTA TATCCTCGGC CTGATGGGCG TCACGCGGCG GATGCGCGTG
TTCGATGACC CCAGCCTGCA AATCTGGTTC GCGATCGCCG GGGTCGGCGC GCTGATCATC
GCCGCGGGCA TCGGCGCGAT GCTCGTCCAG TTCGCGGTCA GCATCTGGCG CCGCAAGGAG
CTCGCCGAGG AAAGCGGCGA TCCGTGGGAC GGGCGCACGC TCGAATGGGC GACCAGCTCG
CCGCCGCCCG ACTATAATTT CGCCTTCACG CCCGTCATTC ACGACCTCGA CGCCTGGTAC
GACATGAAGA AGCGCGGGGG GCAGCGGCCG GTTGGCGGGT TCCGCGACAT TCACATGCCG
AGCAATACGG GCGCGGGGAT CATCCTGTCG GGCCTCTGCC TTGTCCTGGG GTTCGCGCTC
GTCTGGCATA TCTGGTGGCT GGTCGGGCTG AGCTTCGTCG CGGTGATCGC GGGGGCGATC
ATCCACACCT TCAACTACAA GCGCGATTTC GACATTCCGG CGGCGACCGT CGCGGCGATC
GAGGGCGCGC GCACCCGCCA GCTGGCGGCC GGAGCCTGA
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| Protein sequence | MSDAIIPHPA PPTHPIFGKL SVDAIPLHEP ILVATFIGVA IGGIAVLALL TRYRLWGYLW
KEWFTTVDHK RIGIMYMILG LIMFLRGFAD AIMMRLQQVM AFGGSEGYLN AHHYDQVFTA
HGVIMIFFVA MPFITGLMNY IVPLQIGARD VSFPFLNNFS FWMTSAGAAL TMISLFVGEY
AQTGWLAYPP LSGIAYSPNV GVDYYIWGLQ IAGVGTTLSG INLIVTILKL RAPGMGLMKM
PVFTWTSLCS NILIVASFPI LTATLALLSL DRYAGTNFFT NDLGGSPMMY VNLIWIWGHP
EVYILILPLF GVFSEVTSTF SGKRLFGYTS MVYATVCITI LSYIVWLHHF FTMGSGASVN
SFFGITTMVI SIPTGAKLFN WLFTMYRGRI RYELPMMWTI AFMLTFVVGG MTGVLLAVPP
ADFVLHNSLF LIAHFHNVII GGVLFGLFAA INYWWPKAFG FKLDVFWGKV SFWCWVVGFW
VAFTPLYILG LMGVTRRMRV FDDPSLQIWF AIAGVGALII AAGIGAMLVQ FAVSIWRRKE
LAEESGDPWD GRTLEWATSS PPPDYNFAFT PVIHDLDAWY DMKKRGGQRP VGGFRDIHMP
SNTGAGIILS GLCLVLGFAL VWHIWWLVGL SFVAVIAGAI IHTFNYKRDF DIPAATVAAI
EGARTRQLAA GA
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