Gene Sala_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1459 
Symbol 
ID4081270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1513392 
End bp1514570 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content64% 
IMG OID638009824 
Productpeptidase M19, renal dipeptidase 
Protein accessionYP_616505 
Protein GI103486944 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0893597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCAAC TCGCAATCCT GTTGACCGCG ACCGCGCTCG CCGCCTGTTC GACCGGCGGC 
GACAAGCCCA AGGCAGCCGA AGCCCCGCTG CACAGCCGGA TGCTCGTGCT CGACACCCAT
CTTGACACGC CGCTCCATTT CGAGCGCGCG GGGTGGAGCT TTGCCGACCG CCACACCCTC
GCCGACGATA TGGTCCAGCT CGACATTCCA CGAATGAAGG ACGGCCATCT CGATGGCGGC
TTCTTTGTCA TTTACACCGA ACAGGGTCCA CTGACCGCCA AGGGTTATGC CGACGCCCTC
GCCTTTGCGC GGGGGCGTTC GGACCTGATC GACAGCACGC TCGCCAAATA TCCCGACGCG
ATCGCCCCCG CGCGCACGGC GGCCGACGCC AGGAGGCTGA ACAGGGAAGG CAAGCTGATC
GCCTTCAAGT CGATGGAAAA CAGCTATCCG CTCGGCGAGG ATCTGACGCT GCTCGCGGAG
TTTTACGCCA GGGGCCTGCG CATGGCGGGG CCGGTCCATT CGCGGACCAA CCAGTTCGCC
GACAGCGCGA CCGGCGAGGC GCGCTGGAAG GGACTGAGCC CGCTCGGCAA GCGTTGGGTC
GCCGAAATGA ACCGGCTGGG TATCGTCATC GACGCCAGCC ATTCGTCGGA TGCGGCGTTC
GACCAGATGC TCGAACTGTC GAAATATCCG ATCATCCTCT CGCACTCCAG CCTGCGCTCG
GCCCATGATC ATCCGCGCAA CCTCGATGAA GCGCGGCTGA AGGCGCTCGC GGCCAAGGGC
GGGGCGATGT GCATTTCAAC GATCTTCCTG TCGGACATGA ACATGACCCC GGCACGCGCC
GGGCTGTTCG GCCAATATGA GCGGATCGGC GCGATGACCC CGGCCGAGCA GGCCGACCTC
AACCGCAAAT GGCGCGAGCT CGACCAAAGC GAGCCATTAT GGGCCGCCGA TTTCGAGGAT
TATATGAAGA TGGTGCTGCG CGCGATCGCG GTCGCGGGCG CCGATCATAT CTGCTTCGGC
GCCGACTGGG ACGGCGGCGG CGGCCTGAAG GGCATAGAGG ACATCACCGC ACTGCCCAAG
GTCACCGCGC GGCTGAAGGA AGCGGGCTAT TCGGACGCCG ACATCGAAAA AATGTGGAGC
GGCAACGTGC TGCGCATCTT GGCGGCGCAG GGGAAATAG
 
Protein sequence
MKQLAILLTA TALAACSTGG DKPKAAEAPL HSRMLVLDTH LDTPLHFERA GWSFADRHTL 
ADDMVQLDIP RMKDGHLDGG FFVIYTEQGP LTAKGYADAL AFARGRSDLI DSTLAKYPDA
IAPARTAADA RRLNREGKLI AFKSMENSYP LGEDLTLLAE FYARGLRMAG PVHSRTNQFA
DSATGEARWK GLSPLGKRWV AEMNRLGIVI DASHSSDAAF DQMLELSKYP IILSHSSLRS
AHDHPRNLDE ARLKALAAKG GAMCISTIFL SDMNMTPARA GLFGQYERIG AMTPAEQADL
NRKWRELDQS EPLWAADFED YMKMVLRAIA VAGADHICFG ADWDGGGGLK GIEDITALPK
VTARLKEAGY SDADIEKMWS GNVLRILAAQ GK