Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1444 |
Symbol | |
ID | 4081526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1492186 |
End bp | 1492722 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638009809 |
Product | NusG antitermination factor |
Protein accession | YP_616490 |
Protein GI | 103486929 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCT GGTACATCAT TCACGCCTAT TCGGGTTTCG AGAACAAGGT TCGCGATTCG GTGCTCGCCG AAGCCGAACG CATGGGCCTC ACCGACTTCG TCGAAGCGGT CGAGGTGCCG GTCGAAACCG TCACCGAAGT GAAACGCGGC AAGAAGGTTC AGGCCGAACG CAAATTCTTC CCCGGCTATG TTCTCGCCAA GCTGACGATG ACCGACGATG TCTATCACCT CGTCAAGAAC ACGCCGAAGG TCACGGGCTT TCTCGGCTCG TCGGGCAAGC CGCAGGCGAT CAGCGAGGCG GAGGCGGCGC GCATCCTCAA CAGCAAGGAA GAGGCTGCGG CGCGTCCGAA GACCGAAATT CGCGTCGATT ATGAAATCGG CGATCAGGTC AAGGTGCTCG AAGGACCGTT CGCGAGCTTC AATGGCGTGG TCGAGGAACT CGACTTCGAC AAGGCGCGCG TCAAGGTCAG CGTGTCGATC TTTGGCCGCG CCACGCCGGT CGAGCTCGAT TTCGAGCAGG TTGAGCGCAT GAAGTGA
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Protein sequence | MARWYIIHAY SGFENKVRDS VLAEAERMGL TDFVEAVEVP VETVTEVKRG KKVQAERKFF PGYVLAKLTM TDDVYHLVKN TPKVTGFLGS SGKPQAISEA EAARILNSKE EAAARPKTEI RVDYEIGDQV KVLEGPFASF NGVVEELDFD KARVKVSVSI FGRATPVELD FEQVERMK
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