Gene Sala_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1444 
Symbol 
ID4081526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1492186 
End bp1492722 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content60% 
IMG OID638009809 
ProductNusG antitermination factor 
Protein accessionYP_616490 
Protein GI103486929 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCT GGTACATCAT TCACGCCTAT TCGGGTTTCG AGAACAAGGT TCGCGATTCG 
GTGCTCGCCG AAGCCGAACG CATGGGCCTC ACCGACTTCG TCGAAGCGGT CGAGGTGCCG
GTCGAAACCG TCACCGAAGT GAAACGCGGC AAGAAGGTTC AGGCCGAACG CAAATTCTTC
CCCGGCTATG TTCTCGCCAA GCTGACGATG ACCGACGATG TCTATCACCT CGTCAAGAAC
ACGCCGAAGG TCACGGGCTT TCTCGGCTCG TCGGGCAAGC CGCAGGCGAT CAGCGAGGCG
GAGGCGGCGC GCATCCTCAA CAGCAAGGAA GAGGCTGCGG CGCGTCCGAA GACCGAAATT
CGCGTCGATT ATGAAATCGG CGATCAGGTC AAGGTGCTCG AAGGACCGTT CGCGAGCTTC
AATGGCGTGG TCGAGGAACT CGACTTCGAC AAGGCGCGCG TCAAGGTCAG CGTGTCGATC
TTTGGCCGCG CCACGCCGGT CGAGCTCGAT TTCGAGCAGG TTGAGCGCAT GAAGTGA
 
Protein sequence
MARWYIIHAY SGFENKVRDS VLAEAERMGL TDFVEAVEVP VETVTEVKRG KKVQAERKFF 
PGYVLAKLTM TDDVYHLVKN TPKVTGFLGS SGKPQAISEA EAARILNSKE EAAARPKTEI
RVDYEIGDQV KVLEGPFASF NGVVEELDFD KARVKVSVSI FGRATPVELD FEQVERMK