Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1417 |
Symbol | |
ID | 4081734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1471095 |
End bp | 1471388 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638009783 |
Product | integration host factor, alpha subunit |
Protein accession | YP_616464 |
Protein GI | 103486903 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.097817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.411662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAG GAACGCTTAC GCGCGCAGAT ATTGCGAGCC GGATCAATCA GCAGATCGGG CTGTCGCGCA ATGAATCGGC CGCCATCGTC GAATCGATTC TCGATCATAT GTCCGATGCG CTTGCCGCTG GTCAGAATGT GAAGATTTCG GGTTTTGGCA CCTTTGTCCT GCGCGACAAG GCGCAGCGAA TCGGCCGCAA TCCCAAAACG GGCGTGGAAG TGCCGATCCT GCCGCGGCGG GTGATGACCT TTCGCGCCAG CCAGTCGATG CGCGCCCGCG TCGCGGGCAA ATAG
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Protein sequence | MSAGTLTRAD IASRINQQIG LSRNESAAIV ESILDHMSDA LAAGQNVKIS GFGTFVLRDK AQRIGRNPKT GVEVPILPRR VMTFRASQSM RARVAGK
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