Gene Sala_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1353 
Symbol 
ID4082821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1411338 
End bp1412288 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content59% 
IMG OID638009719 
Productintegrase catalytic subunit 
Protein accessionYP_616400 
Protein GI103486839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.4232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0729626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACAGA TTTTACACGG GAGCGCCAAG ACCACGCACG CCATTCGAGG CGAGCTACAG 
CGATCGCAAG CTTCGGTCGC GAGCCTCGCG AGGAAGTACG GGATCAACGA GAAGACCGTC
TTGAAGTGGC GCCATCGGCA GTCTGTGGAC GACATGCCGA TGGGGCCGAA GGAGCGCCGC
AGCACCGTCC TCTCGCCTAT GGAAGAAGCT GCCATCGTGG CGTTGCGGGT TCAGGCGCGG
TTGCCGCTCG ACGACGTCTA CATCGCGCTA AAGGACGTGA TCCCGCAGTT GACGCGCTCG
TCGCTGCATC GCTGCCTGCA ACGGCATGGC ATCAGCCGCC TGCCCAAAGC GGACCGCGAG
AAGCCGAAGA AGTTCAAGGA TTATGAGATC GGCTACTTCC ACATCGACAT CGCCGAGCTA
CGCTATGAGG GCGGCAAGGC CTTCCTCTAT GTGGCGGTGG ACCGCACCTC GAAGCTGGTC
TTCGCCCGCA TCTATCGCAA GGCCACAAAG CTTGCCGCCG CAGCTTTCCT CAAGGTGCTG
GTCAAGACCG TGCCTTACAG GATCCACACC GTGCTGACCG ACAATGGCGT CCAGTTCGTC
CAGCCCCAGC GCGGCCAGAG CCGGCAATGG CTGATCCACA TCTTCGAGCG GGTCTGCCTC
GAAAACGGCA TCGAGCATCG GCTGACCAAG CCCTACCACC CATGGACCAA TGGTCAAGCC
GAGCGGATGG TCCGAACCAT CAAGGAAGCG ACCGTCAAAT CCTTCCATTA TGCCTCGATC
CAGGAACTGC GACGACACGT CAGCGACTGG CTGATCGCCT ACAACTTCGC CAAGCAGCTC
AAGGCTCTCA AGTTCAGGAC ACCATATGAA GCCATCGAGG AACTCTGGAA ATCAAAGCCC
GATGTCTTTA TCGTCAAACC CAACCATCAC ATGCTGGGAC CAAACACCTA G
 
Protein sequence
MGQILHGSAK TTHAIRGELQ RSQASVASLA RKYGINEKTV LKWRHRQSVD DMPMGPKERR 
STVLSPMEEA AIVALRVQAR LPLDDVYIAL KDVIPQLTRS SLHRCLQRHG ISRLPKADRE
KPKKFKDYEI GYFHIDIAEL RYEGGKAFLY VAVDRTSKLV FARIYRKATK LAAAAFLKVL
VKTVPYRIHT VLTDNGVQFV QPQRGQSRQW LIHIFERVCL ENGIEHRLTK PYHPWTNGQA
ERMVRTIKEA TVKSFHYASI QELRRHVSDW LIAYNFAKQL KALKFRTPYE AIEELWKSKP
DVFIVKPNHH MLGPNT