Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1301 |
Symbol | |
ID | 4082593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1360975 |
End bp | 1361463 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638009663 |
Product | NADH dehydrogenase subunit I |
Protein accession | YP_616348 |
Protein GI | 103486787 |
COG category | [C] Energy production and conversion |
COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00320411 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.488956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTACG TAGGCCATCT CGTCAAAAGC TTCACCTTGT GGGAGTTTGT GAAGGCGCAC GCCCTCACGC TGAAGTATTT CTTCAAGCCG AAGGCGACGA TCAACTATCC GTTCGAGAAG AACCCGCTGT CGCCCCGTTT CCGTGGCGAA CATGCGCTGC GCCGCTATCC GAACGGCGAG GAACGTTGCA TCGCGTGCAA GCTGTGCGAA GCGGTGTGCC CGGCGCAGGC GATCACGATC GAGGCCGAGC CGCGCGACGA CGGCAGCCGC CGCACGACGC GCTACGACAT CGACATGACC AAGTGCATTT ACTGCGGCTT CTGTCAGGAA GCATGCCCGG TCGATGCGAT CGTCGAGGGG CCGAACTTCG AATATGCGAC CGAAACGCGC GAAGAACTGC TCTATGACAA GGCCAAGCTG CTCGCCAATG GCGACAAATG GGAACGCGCG ATCGCGGCGA ATCTTGCCGC CGACGCGCCC TATCGGTAA
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Protein sequence | MSYVGHLVKS FTLWEFVKAH ALTLKYFFKP KATINYPFEK NPLSPRFRGE HALRRYPNGE ERCIACKLCE AVCPAQAITI EAEPRDDGSR RTTRYDIDMT KCIYCGFCQE ACPVDAIVEG PNFEYATETR EELLYDKAKL LANGDKWERA IAANLAADAP YR
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