| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1211 |
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| Symbol | |
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| ID | 4080706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1251170 |
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| End bp | 1253719 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009572 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_616260 |
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| Protein GI | 103486699 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTGG TAATTGTGGA ATCGCCGGCA AAGGCGAAAA CGATCGAGAA ATATCTCGGT
CGCGATTTCA AGGTGCTGGC CAGTTATGGC CATGTCCGCG ACTTGCCGCC GAAGGACGGC
TCGGTCGATC CCGACGACGG CTTTGCAATG CAGTGGCAGC TTTATCCCGA CAAGGCGAAG
CGGCTGAAGG AGATTTCGGA CGCCGCCAAG GGCGCCGACC GCCTGATCCT CGCGACCGAC
CCCGATCGCG AGGGCGAGGC GATCAGCTGG CATGTGCAGG AATTGCTGCG CAGCAAAAAG
GCGCTGCCCG CGGCCGTCGA TCGCGTGACG TTCAATGCGA TCACCAAGCA GGCGGTGACT
GACGCGATGA GGCATCCGCG CGAGCTCGAC ACCGACCTGA TCGACGCCTA TCGCGCACGC
CGCGCGCTCG ACTATCTGGT TGGTTTCACA TTGTCGCCGG TGCTGTGGCG CAAGCTGCCC
GGTGCCAAGT CGGCGGGGCG GGTCCAGTCG GTCGCGCTGC GCCTCGTCGT CGAACGCGAG
CGCGAGATCG AGGCCTTTGT TGCGCAGCAA TACTGGTCGG TGACCGGTCT GTTCGAAATG
GGCGGCACGC CCTTCAAGGC GCGGCTGTCG CGTTGGAGGG GCGACAAGAT CGAGCGGCTC
TCGATCACCT CCGAAGCCGA TGCGCGCGCG GCCGAAGCCG ACGTGAAGGC GGGCCATTTC
ACCGTCGATA CGGTCGAGAC GAAGCCCCTG ACCCGCAACC CGCCGCCGCC CTTCACCACC
TCGACCCTGC AACAGGAGGC TGCGCGCAAG CTGGGTTTTT CGGCGAGCCA CACGATGCGC
ATCGCGCAGG CGCTCTACGA AGATGGCGCG ATCACCTATA TGCGGACCGA CGGCGTCCAG
ATGGACGGCA GCGCGATCAG CGCCGCGCGC AAGGCGATCG CGACGCGCTA CGATGGCGGC
TATGTCCCGG ACAAGCCGCG GCAGTATCAG ACCAAGGCGA AAAATGCGCA GGAAGCGCAT
GAGGCCATCC GCCCCACCGA TTTCGGCAAG GACAAGGTGG GCGGCGGTGA CCATGCGCGG
CTCTACGAGC TGATCTGGAA GCGCGCGCTC GCCAGCCAGA TGGCGTCGGC GCGGCTCGAA
CGCACCAGTG TCGAATTGAG CGATGGCACC GGCAAGACGA CGCTGCGCGC GACGGGGCAG
GTGGTGAAGT TTCCGGGCTT CCTTGCTCTC TATGATGAAG GCCGCGACGA TGCAGAGGAC
GAGGATGCGC GCCTGCTGCC GGCGATGGCG AAGGGAGATG CGCCGGCGAA AACCGGCGTC
GAAGTCGAGA GGCACGAAAC GCAGCCTCCG CCACGCTATT CGGAAGCGAG CCTCGTCAAG
AAGATGGAGG AACTCGGCAT CGGGCGACCG TCGACCTATG CCTCGATCCT TCAGGTACTG
AAGGATCGCG ACTATGTGCG GGTCGAGAAG AACCGCTTCA TTCCCGAAGA GAGTGGTCGG
CTGCTCACCG CCTTCCTCGA ACGCTTCTTC GAACGTTATG TCGGCTATGA TTTCACGGCG
GAGCTTGAGG AAGAGCTGGA CGACGTATCA GGCGGCCGCG CGCAGTGGCA GGCGGTGCTC
GAACGCTTCT GGCGCGACTT CAAGCCGCGC ACCGGCGAGG TGATGGAGCA GAAGCCATCG
GAGATTACCG CGGCGCTCGA CGAGTTCCTC GGTCCCTATC TCTTCCCCGA CAAGAGCGAC
GGTAGCGACC CCCGGCTCTG CCCCAATTGC GGCACCGGGC GGTTGGCGCT GCGTGGCGGC
AAGTTCGGGC CATTCATCGC GTGCAGCAAC TATCCCGACT GCAAGTTCAC GCGCAAATTC
GCGCAGTCAG GTGGTAATGG CGAGGCGGAT AACGGACCCG AGACGCTGGG CACCGATCCC
GAAAGCGGGC TGGAGGTCAC GAAGCGCAGC GGACGTTTCG GTCCATACAT CCAGCTCGGC
GAGGGGAGTG AGGCAAAACG CTCGTCGATC CCCAAGGACA TCCCGGCGGA GGATTTCGAC
CTCGACTATG CGCTCCGGCT CCTCAGCCTG CCGCGCGAGG TCGGGGTGCA TCCCGAAAGC
GGCAAGCCGA TCATGGCCGG CCTGGGTCGC TACGGCCCCT ATCTGCTCCA CGATGGCAAA
TATGCGAAGC TGGGCGGCAC CGCCGAAATC TTTGACATCG GCATGAACGC CGCGGTCGTC
CGTATCGCCG AGGCGGCGAA TGGCGGCGGA CGCGGGCGTG CAAAGGCCGA ACCGCTCAAC
ACCTTTGGCC CGCACCCGAC GAGCGGCGGC GAGATGAAGC TGATGGAAGG GCGCTATGGT
CCCTATGTCA CCGACGGCAC GACCAACGCC ACCTTGCCCA AGACCACCGA CCCGGCGACG
CTGACGATGG AAGAGGCGAT CGCGCTGATC GACGCACGCG CGGCGAAGGG CCCGGTGAAG
GGCAAGAAGA AGGCGGCGCC GAAGAAAAAG GCGGCTGCGA AGAAAGCTGC GGCGAAGGAG
GCACCCGCCA GGAAGACGGC GGCCGAGTAG
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| Protein sequence | MQLVIVESPA KAKTIEKYLG RDFKVLASYG HVRDLPPKDG SVDPDDGFAM QWQLYPDKAK
RLKEISDAAK GADRLILATD PDREGEAISW HVQELLRSKK ALPAAVDRVT FNAITKQAVT
DAMRHPRELD TDLIDAYRAR RALDYLVGFT LSPVLWRKLP GAKSAGRVQS VALRLVVERE
REIEAFVAQQ YWSVTGLFEM GGTPFKARLS RWRGDKIERL SITSEADARA AEADVKAGHF
TVDTVETKPL TRNPPPPFTT STLQQEAARK LGFSASHTMR IAQALYEDGA ITYMRTDGVQ
MDGSAISAAR KAIATRYDGG YVPDKPRQYQ TKAKNAQEAH EAIRPTDFGK DKVGGGDHAR
LYELIWKRAL ASQMASARLE RTSVELSDGT GKTTLRATGQ VVKFPGFLAL YDEGRDDAED
EDARLLPAMA KGDAPAKTGV EVERHETQPP PRYSEASLVK KMEELGIGRP STYASILQVL
KDRDYVRVEK NRFIPEESGR LLTAFLERFF ERYVGYDFTA ELEEELDDVS GGRAQWQAVL
ERFWRDFKPR TGEVMEQKPS EITAALDEFL GPYLFPDKSD GSDPRLCPNC GTGRLALRGG
KFGPFIACSN YPDCKFTRKF AQSGGNGEAD NGPETLGTDP ESGLEVTKRS GRFGPYIQLG
EGSEAKRSSI PKDIPAEDFD LDYALRLLSL PREVGVHPES GKPIMAGLGR YGPYLLHDGK
YAKLGGTAEI FDIGMNAAVV RIAEAANGGG RGRAKAEPLN TFGPHPTSGG EMKLMEGRYG
PYVTDGTTNA TLPKTTDPAT LTMEEAIALI DARAAKGPVK GKKKAAPKKK AAAKKAAAKE
APARKTAAE
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