Gene Sala_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1200 
Symbol 
ID4080695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1240596 
End bp1241690 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content63% 
IMG OID638009561 
Productalpha/beta hydrolase fold 
Protein accessionYP_616249 
Protein GI103486688 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTTT CCATCCTTGT CGCGGCGACG CTCGCCGCCC TCTCCACCCC CGCTGCCGCC 
CAATCCGAAG ACCCTTACGC CCCCGCGCGC GCGATCGTCG CCGACATCGG CAAGATCGTG
ACGCCGAACG GCGTTCAGGA AACCTTTGAG GTCACGCTCG GTGGCGCGCG GCAGGTCGTA
AACGTGCGCG GCGCCGACCG GGACAATCCG ATCCTGATCT TTGTCCACGG CGGCCCCGGC
GCCGTCGAAA TGCCGTTCGC CTGGGCTTTT CAGCGTCCAT GGGAAGACGT CTTCACCGTC
GTTCATTACG ACCAGCGGGG CGCCGGGCGA AGCTATCCGC TGAACGACCC CGAAGCGTTG
GCCCGGACCA TGACGCCCGA ACGCTATCGC GACGATGCAA TCGAACTGAT CGAGCATCTG
CAAAAGCGGT ATGGGAAGAA AAAGGTCGTG CTGATGGGGC ACAGCTGGGG TTCGATCGTC
GGCCTGTCGG TCGCGCTGAA GCGTCCCGAC CTGTTGCACG CCTATGTCGG CGTCGGGCAG
GGCATAGATT TCCGCAAAGG CGAAAAGGCC GGTATGGCGT GGACACGCGC CAAGGCGCTG
GCCGACGGGA ATAAGGAGGC CGTCGCCGCC ATCGAGGCGC TCGCGCCCTA TCCGCAGGGA
GAGTTCACCA TCGCCAAGGC CGATGGCTGG CGCAAATATG CGATTCCCTA CGGATCGCTG
ATGTACAACA AGCCCGACCT GAAACGCTAT TTCCAGACTC CGCTGCTTTC GCCCGAATAT
GGCCCCGACG ACATCGGGGC ATGGGGGAAG GGCAGCGCGT TTTCGGTGGC GACGCTGTGG
CCGCGGCTCG CCGACGTCAG CTTCAAGTCG GTACGCAAGA TGGAGGTACC GATCGTCCTC
CTGCTAGGAC GGCACGATTA TACCGTGCCT TCGCCGGTAG CAGCCGACTG GTTCGCGAAG
GTCGAGGCGC CCTCGAAAAG GCTCGTTTGG CTCGAACATT CGGCCCATAT GCCGATGGTT
GAGGAGCCGG GGCGTTTCTT TGCGGCGCTG CTTCGCGACG TTCTTCCCCT GACGGACGCG
GAAGCGACAC CATGA
 
Protein sequence
MRFSILVAAT LAALSTPAAA QSEDPYAPAR AIVADIGKIV TPNGVQETFE VTLGGARQVV 
NVRGADRDNP ILIFVHGGPG AVEMPFAWAF QRPWEDVFTV VHYDQRGAGR SYPLNDPEAL
ARTMTPERYR DDAIELIEHL QKRYGKKKVV LMGHSWGSIV GLSVALKRPD LLHAYVGVGQ
GIDFRKGEKA GMAWTRAKAL ADGNKEAVAA IEALAPYPQG EFTIAKADGW RKYAIPYGSL
MYNKPDLKRY FQTPLLSPEY GPDDIGAWGK GSAFSVATLW PRLADVSFKS VRKMEVPIVL
LLGRHDYTVP SPVAADWFAK VEAPSKRLVW LEHSAHMPMV EEPGRFFAAL LRDVLPLTDA
EATP