| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1186 |
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| Symbol | |
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| ID | 4080834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1226160 |
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| End bp | 1227608 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638009547 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_616235 |
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| Protein GI | 103486674 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0407507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGAAC AGGCGATCGC CGCGGGCGAC CTGGATGCGG CGCGGCGCGC GGCGCAGCAG
GTCTGGACGG GCGGTGACCA TCGCTTCGAC GCGCAGCTCG TCCTCCTGGT CGATGCGATG
CGGCGATCCG ACTGGAAGGC GGCGCGCGCC TATCTGGCGG CGCCGACCGA CAAGACCGGC
GCGAATACGG GCGCGCGGCT GATCGTGCCG ATCTTTCAGG CTTGGATCGA TGTCGGCGCG
CGCGCGCGGA GGCCCGAGCG CCACCTGATG GCGACCCCTG GCACAGGCGC AGAACCGGCG
TTGATGCTCC AGGTCGTGCA GGTGCAGGCG GCAACGCGCC GCGCGGGCGA GGCGGCGCGA
CTGGCGGACG AGATTGGTCT GAGCGACCGA CTCAGCCAGC TCGTCGCGTT GCGCGCCGCG
GCGACGCTCG ATCGCGCGGG CGAGGGCGCC GCCGCCGGCC GACTCCGTGC GCGGATCGCG
CTGGCGGCCG GTGAGCGCGA GGACCCGATG CTGCTGCTGC CCGATCAGCC GGTGACGACC
CCGCGCGCGG GAAGCGCGCA GTGGCTCGGC CTGCTCGCCG ACGGCCTGGC GCGCACGCCG
AACGCCAGCA CCAAATTGCC GTTGCTGTTC GCCCGCGCCG CGCATTGGCT GAACGACGAG
GATTGGGCGG TGCGCGCAAC GCTGGTCGAG GCACTGGCTC GCGACGGGCA GAATGGCGCG
GCCATGGCGC TGCTTGACGG CCTGCGAGGA AAGTTGCCCG CGGTGCTGGT CATGCGACAG
GCCGAACTGA TCGCAGACAG CGGCGATTTG GCGGCAGGCC TCGAACGCGC CGAGGCGGCC
GCGCGCAACG ATGCGCCGCG CATGTTGCTG GTGCGGCTTG CGGACCTTGC GCGGCGGTCG
GGCAGTGCGG CGGCCGCGGC GGCCGCTTAT GAGCGGCTGG AGGCCGCGCT GGGTGAGGAG
GACCGCGCGC TGCGCAGTTC GCTGTTGCTT GCTCGCGCCG AGTTGATGTT GCAGGCGGAC
CAGTGGGACG CAGCGGCGCC GCTGATCGAG CGCGCCGTGG CCTTGCAGCC CGACGATCCC
GCCGTGCTCA ATTTCGCGGG CTATTCGGCG CTCGAACGGC GCAAGGACAT GAAGCAGTCG
CTCGCGCGGA TCGAGGCGGC GTGGGCCAGG GCACCGCAGA ATGCGAGCAT CACCGACTCG
CTCGGATGGG CCTATTTCCT GATCGGGCGC ACCGACGAAG CGGTCGAATT GCTCGAACGA
GCACAGCGCG GCGAACCCGA CAATGCGGTG ATCGTCGAAC ATCTGGGCGA TGCTTATTGG
CAGGCGGGTC GCAAGTTCCA GGCGCGCTAT AACTGGCGCG CGGCAGCGCT GCTCGCCGAC
GCCGAGATGG CGACGCGGAT CGAGGCGAAG CTGCGCGACG GGCTGACCCC GGCAACGGTG
GCACCATGA
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| Protein sequence | MLEQAIAAGD LDAARRAAQQ VWTGGDHRFD AQLVLLVDAM RRSDWKAARA YLAAPTDKTG
ANTGARLIVP IFQAWIDVGA RARRPERHLM ATPGTGAEPA LMLQVVQVQA ATRRAGEAAR
LADEIGLSDR LSQLVALRAA ATLDRAGEGA AAGRLRARIA LAAGEREDPM LLLPDQPVTT
PRAGSAQWLG LLADGLARTP NASTKLPLLF ARAAHWLNDE DWAVRATLVE ALARDGQNGA
AMALLDGLRG KLPAVLVMRQ AELIADSGDL AAGLERAEAA ARNDAPRMLL VRLADLARRS
GSAAAAAAAY ERLEAALGEE DRALRSSLLL ARAELMLQAD QWDAAAPLIE RAVALQPDDP
AVLNFAGYSA LERRKDMKQS LARIEAAWAR APQNASITDS LGWAYFLIGR TDEAVELLER
AQRGEPDNAV IVEHLGDAYW QAGRKFQARY NWRAAALLAD AEMATRIEAK LRDGLTPATV
AP
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