Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1173 |
Symbol | |
ID | 4080879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1207666 |
End bp | 1209687 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638009534 |
Product | hypothetical protein |
Protein accession | YP_616222 |
Protein GI | 103486661 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.222965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGGC ATCGCGCCTC TAAAGCAGCG CGCAACCGCG CCTTGTTGCG CCCTGCCCGA AAGACTGCCT GCTCCATGAT TACCGCCATC CGCGCCATGT TTTCCTCGAC GATCGGCAAG TTCCTCGCGC TGGCGTTCGT CGTCCTTGTC GGCGTCGCCT TCGCGCTGAG CGACGTCACC GGGAACTCGA CGTTCGGCGG GATCGGCGGG GCCAATGTTG CGAAGGTGGG CGGCGAAGAG ATCGGCGTCG GCGAACTGCG CGACCGTGTG CGCCAGGCCT ATGACCAGGC GCGCCGCAAC CAGCCGGGGC TGACGATGGC GGCGTTCGTC GAAAACGGCG GACTCGACCA GGTGCTCGGC CAGCTCATCG ACGGGCTCGC CTTCGACCAA TATGCGACCG AGCTGGGTTT TGGCGTCAGC AAGCGGCTGA TCGACGGGCG AATCGCCGAC CTGCCGGCCT TTGCGGGCGT GTCGGGCAAG TTCGACCAGA CGGTGTTCGA AAACTTCCTG CGTCAGAACG GGATCAGCGA AGCGCAGCTC CGCCGCGACC TGCGCCAGCA GATATTGCTC GAACAGCTCG CCGCGCCGAT CGCGCAGATG CCGCGTATCG CGCCCGCTCT GGCCGAACCC TATGCCGCGC TGCTGCTCGA ACAGCGGCGC GGGCAGGCGA CCTTCATTCC GGCGAGCGCT TTCGCGCCGA AGGGCGATCC CGGCGATGCG GCGCTGCGCC GCTTCCTCAC GCAGAATGCG GCGAAGTTCA CCGTGCCCGA ACGCCGCGTG ATCCAATATG CGATGTTCGA CCGCGCCTCG GTGCCGGTGC CTGCGGTGAC TGATGCCGAA ATCGCCAGGG TTTATAAGGA TAATGCCGCG CAATATGCCG CGACCGAAAC GCGCCGCTTT GCGCAGGTCA TCCTGCCCGA TCAGGCCGCG GCCAACCGCC TGGCCGCCAA GGTGCGTAGC GGAGCTTCGC TCGCAAGCGC GGCTGCCGAA GCGGGCCTGT CGGCGTCCAC GACGGGCGAC CTCGGCCAGA GCGCCTATGC CGCGACGACC AGTGCGGCTG TCGCCAGGGC GGCCTTTGCT GCAAAGCGGG GCGAGGTGGT CGGGCCGCTC CAGACCGGGC TCGGCTGGAC CGTGGTGCGC GTCGAGGATG TGACGACGCG CCCGGCGCGC AGCCTGGCCG ACGCCAGTGC CGAGATTCGC GCCGAACTGG CCAGCAACAA GGCGAATGAG GCGATCGTCG ATTATTACAA TGCGATTCAG GATGCGGTGA ACAGCGGCGC GTCGATCGAG GAAATCGCCA CTGACCGCAA GCTCCAGATC GTCGAAACCC CGGCGATCCT GCCGAACGGG CGCGCGCCGG GCCAGCCGGG TTTTACGCTT GCGGCGGACC TCGCGCCGCT CGTCGCGCAG GCTTTCCAGG TCGGCGGCGA GGGCGAGGGG CAGATCGCCA CGATCGTCGA AAATGAGAAG TTCGCTGTCT TTGCGGTGAA GTCGATCATC GCCGCTGCGC CGCCGCCCTT CGCGCAGATC CGCGGTGAGC TGCTTTCCGA ATGGCGCTTT GCCGAGGGGC AGAAGGTGGC GAGGGACAAG GCGCGCGCGA TCGCCAGGGC GGTCGAAGGC GGCAAGAGCC TGAACGAAGC CGTTGCCGCC GCAGGGCCGA ATATCGGCAA CGTGCAGGCG ATCGGCGGGC GCCGCGCCGA ACTCGGCGCC AATGGCGAGC GCGTCCCGCC CGAACTGGCG CTGCTCTTTT CGATGGCCGA AGGGAGCGTG AAGACGCTGG AGATTCCCGG CAACCGCGGC TGGATGGTGA TCGCACTCGA TGAGGTGCGC CGCCCCGATC CGAAGGCGAT CGAGCCCGAG CGCGTTGCGG CCATCGCGCG GCCGCTCGCC CCCGCCTTTG GCAATGAGCT GCTCGAACAG CTTGCCGCCG AGGCCAGGCG GCGCGTCGGG GTGACGATCA ACAAGGGGCT GGTCGACCAG CTGCGCCGCG AGCTGACCGG CACCGCGCCG GTCGCCGAAT AA
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Protein sequence | MPRHRASKAA RNRALLRPAR KTACSMITAI RAMFSSTIGK FLALAFVVLV GVAFALSDVT GNSTFGGIGG ANVAKVGGEE IGVGELRDRV RQAYDQARRN QPGLTMAAFV ENGGLDQVLG QLIDGLAFDQ YATELGFGVS KRLIDGRIAD LPAFAGVSGK FDQTVFENFL RQNGISEAQL RRDLRQQILL EQLAAPIAQM PRIAPALAEP YAALLLEQRR GQATFIPASA FAPKGDPGDA ALRRFLTQNA AKFTVPERRV IQYAMFDRAS VPVPAVTDAE IARVYKDNAA QYAATETRRF AQVILPDQAA ANRLAAKVRS GASLASAAAE AGLSASTTGD LGQSAYAATT SAAVARAAFA AKRGEVVGPL QTGLGWTVVR VEDVTTRPAR SLADASAEIR AELASNKANE AIVDYYNAIQ DAVNSGASIE EIATDRKLQI VETPAILPNG RAPGQPGFTL AADLAPLVAQ AFQVGGEGEG QIATIVENEK FAVFAVKSII AAAPPPFAQI RGELLSEWRF AEGQKVARDK ARAIARAVEG GKSLNEAVAA AGPNIGNVQA IGGRRAELGA NGERVPPELA LLFSMAEGSV KTLEIPGNRG WMVIALDEVR RPDPKAIEPE RVAAIARPLA PAFGNELLEQ LAAEARRRVG VTINKGLVDQ LRRELTGTAP VAE
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