Gene Sala_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1173 
Symbol 
ID4080879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1207666 
End bp1209687 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content68% 
IMG OID638009534 
Producthypothetical protein 
Protein accessionYP_616222 
Protein GI103486661 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.222965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGGC ATCGCGCCTC TAAAGCAGCG CGCAACCGCG CCTTGTTGCG CCCTGCCCGA 
AAGACTGCCT GCTCCATGAT TACCGCCATC CGCGCCATGT TTTCCTCGAC GATCGGCAAG
TTCCTCGCGC TGGCGTTCGT CGTCCTTGTC GGCGTCGCCT TCGCGCTGAG CGACGTCACC
GGGAACTCGA CGTTCGGCGG GATCGGCGGG GCCAATGTTG CGAAGGTGGG CGGCGAAGAG
ATCGGCGTCG GCGAACTGCG CGACCGTGTG CGCCAGGCCT ATGACCAGGC GCGCCGCAAC
CAGCCGGGGC TGACGATGGC GGCGTTCGTC GAAAACGGCG GACTCGACCA GGTGCTCGGC
CAGCTCATCG ACGGGCTCGC CTTCGACCAA TATGCGACCG AGCTGGGTTT TGGCGTCAGC
AAGCGGCTGA TCGACGGGCG AATCGCCGAC CTGCCGGCCT TTGCGGGCGT GTCGGGCAAG
TTCGACCAGA CGGTGTTCGA AAACTTCCTG CGTCAGAACG GGATCAGCGA AGCGCAGCTC
CGCCGCGACC TGCGCCAGCA GATATTGCTC GAACAGCTCG CCGCGCCGAT CGCGCAGATG
CCGCGTATCG CGCCCGCTCT GGCCGAACCC TATGCCGCGC TGCTGCTCGA ACAGCGGCGC
GGGCAGGCGA CCTTCATTCC GGCGAGCGCT TTCGCGCCGA AGGGCGATCC CGGCGATGCG
GCGCTGCGCC GCTTCCTCAC GCAGAATGCG GCGAAGTTCA CCGTGCCCGA ACGCCGCGTG
ATCCAATATG CGATGTTCGA CCGCGCCTCG GTGCCGGTGC CTGCGGTGAC TGATGCCGAA
ATCGCCAGGG TTTATAAGGA TAATGCCGCG CAATATGCCG CGACCGAAAC GCGCCGCTTT
GCGCAGGTCA TCCTGCCCGA TCAGGCCGCG GCCAACCGCC TGGCCGCCAA GGTGCGTAGC
GGAGCTTCGC TCGCAAGCGC GGCTGCCGAA GCGGGCCTGT CGGCGTCCAC GACGGGCGAC
CTCGGCCAGA GCGCCTATGC CGCGACGACC AGTGCGGCTG TCGCCAGGGC GGCCTTTGCT
GCAAAGCGGG GCGAGGTGGT CGGGCCGCTC CAGACCGGGC TCGGCTGGAC CGTGGTGCGC
GTCGAGGATG TGACGACGCG CCCGGCGCGC AGCCTGGCCG ACGCCAGTGC CGAGATTCGC
GCCGAACTGG CCAGCAACAA GGCGAATGAG GCGATCGTCG ATTATTACAA TGCGATTCAG
GATGCGGTGA ACAGCGGCGC GTCGATCGAG GAAATCGCCA CTGACCGCAA GCTCCAGATC
GTCGAAACCC CGGCGATCCT GCCGAACGGG CGCGCGCCGG GCCAGCCGGG TTTTACGCTT
GCGGCGGACC TCGCGCCGCT CGTCGCGCAG GCTTTCCAGG TCGGCGGCGA GGGCGAGGGG
CAGATCGCCA CGATCGTCGA AAATGAGAAG TTCGCTGTCT TTGCGGTGAA GTCGATCATC
GCCGCTGCGC CGCCGCCCTT CGCGCAGATC CGCGGTGAGC TGCTTTCCGA ATGGCGCTTT
GCCGAGGGGC AGAAGGTGGC GAGGGACAAG GCGCGCGCGA TCGCCAGGGC GGTCGAAGGC
GGCAAGAGCC TGAACGAAGC CGTTGCCGCC GCAGGGCCGA ATATCGGCAA CGTGCAGGCG
ATCGGCGGGC GCCGCGCCGA ACTCGGCGCC AATGGCGAGC GCGTCCCGCC CGAACTGGCG
CTGCTCTTTT CGATGGCCGA AGGGAGCGTG AAGACGCTGG AGATTCCCGG CAACCGCGGC
TGGATGGTGA TCGCACTCGA TGAGGTGCGC CGCCCCGATC CGAAGGCGAT CGAGCCCGAG
CGCGTTGCGG CCATCGCGCG GCCGCTCGCC CCCGCCTTTG GCAATGAGCT GCTCGAACAG
CTTGCCGCCG AGGCCAGGCG GCGCGTCGGG GTGACGATCA ACAAGGGGCT GGTCGACCAG
CTGCGCCGCG AGCTGACCGG CACCGCGCCG GTCGCCGAAT AA
 
Protein sequence
MPRHRASKAA RNRALLRPAR KTACSMITAI RAMFSSTIGK FLALAFVVLV GVAFALSDVT 
GNSTFGGIGG ANVAKVGGEE IGVGELRDRV RQAYDQARRN QPGLTMAAFV ENGGLDQVLG
QLIDGLAFDQ YATELGFGVS KRLIDGRIAD LPAFAGVSGK FDQTVFENFL RQNGISEAQL
RRDLRQQILL EQLAAPIAQM PRIAPALAEP YAALLLEQRR GQATFIPASA FAPKGDPGDA
ALRRFLTQNA AKFTVPERRV IQYAMFDRAS VPVPAVTDAE IARVYKDNAA QYAATETRRF
AQVILPDQAA ANRLAAKVRS GASLASAAAE AGLSASTTGD LGQSAYAATT SAAVARAAFA
AKRGEVVGPL QTGLGWTVVR VEDVTTRPAR SLADASAEIR AELASNKANE AIVDYYNAIQ
DAVNSGASIE EIATDRKLQI VETPAILPNG RAPGQPGFTL AADLAPLVAQ AFQVGGEGEG
QIATIVENEK FAVFAVKSII AAAPPPFAQI RGELLSEWRF AEGQKVARDK ARAIARAVEG
GKSLNEAVAA AGPNIGNVQA IGGRRAELGA NGERVPPELA LLFSMAEGSV KTLEIPGNRG
WMVIALDEVR RPDPKAIEPE RVAAIARPLA PAFGNELLEQ LAAEARRRVG VTINKGLVDQ
LRRELTGTAP VAE