| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1169 |
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| Symbol | |
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| ID | 4080875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1203705 |
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| End bp | 1204388 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009530 |
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| Product | Crp/FNR family transcriptional regulator |
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| Protein accession | YP_616218 |
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| Protein GI | 103486657 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0303416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0506186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCACG CAAGACTTGC CGAACTGCAG AGCCCCGACA GCATCTTTTC CGGCCTTTCG
GTCGAGGATT GGGCCGAAAT CACCCGCCGC GCGGTTCAGG TCAATTTCGC CAAGGGCAAG
GAATTGCTCG TCCAGGGCGA TCCGGGCGAC ATGATGCTGA TCCTGACCGA GGGGACCGCG
CGCGTGTCGA TGCTGACGGC CGGCGGGCGC GAAATCGTCC TCGCTTATGC CGAACCCGGC
GCGGTGCTGG GCGAAATCGC GCTGCTCGAC GGAGGCGAGC GCACCGCATC GGTGACGGCG
ACCAGCGCCG GCAGCGCGCT GCAACTCGGC CGCAACGCGC TCCGCGACTT TGCCGCGAGC
CATCCCGACT TCGCCTGGTC GTTGATGCAG CAGCTCGCGC GTCGGCTGCG TACCGCCGAC
CAGACCATCG AAAGCGACCG CGCCTACGCC TCCGGCCCGC GCCTCGCGCG CTATCTGAAA
CGCTTGATCC GCAAGGATGT CGGCGTCGCA CAGCGCGTCG AACTCAGCCA GACCGAACTC
GGCAATTTCG CCGGAATGAG CCGCGAACAT ATCAACCGCC AGCTCAAAAG CTGGGAAGAA
TCGGGGATCA TCGCGCTCGA ACAGGGCCGC GTGCGTGTGC TGGAACCAGA GATACTCGAA
GACATAAGCG AAAGCGAAGG ATGA
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| Protein sequence | MDHARLAELQ SPDSIFSGLS VEDWAEITRR AVQVNFAKGK ELLVQGDPGD MMLILTEGTA
RVSMLTAGGR EIVLAYAEPG AVLGEIALLD GGERTASVTA TSAGSALQLG RNALRDFAAS
HPDFAWSLMQ QLARRLRTAD QTIESDRAYA SGPRLARYLK RLIRKDVGVA QRVELSQTEL
GNFAGMSREH INRQLKSWEE SGIIALEQGR VRVLEPEILE DISESEG
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