Gene Sala_1147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1147 
Symbol 
ID4080892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1182257 
End bp1183696 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content65% 
IMG OID638009508 
Productmagnesium transporter 
Protein accessionYP_616196 
Protein GI103486635 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) 
TIGRFAM ID[TIGR00400] Mg2+ transporter (mgtE) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.552524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAC GCGAAGAATC CCAGCGGCCC GAGGATGTGG CGATCGCGGA AGAGCGCGAC 
GATTTTCCCC TCGAAACCGA ACTGGACGAA GACGACCGGC TGAAACCCGA TTTTGTGCGC
GACGTGATCG GCCTCGCCGA AGCGGGTGAA GGCGAAGCGG CGCGCGAACG CATCGGCCGC
CTGCACCCCG CCGACATCGC GGACCTGTTC GAACTCGCGC GCTCCGACGA GCGCCCGATG
CTCGCCGCCG TGCTCGGCGA CATGCTCTCC GCCGACGTGC TCGCGGAAAT GAACGATTAT
GTGCGCGAGG AACTGATCGA CCTCCTTGCG CCCGAGCAGG TCGCCGAACT CGCGTCCGAA
CTCGATACCG ACGACGCCGT TGCGATCATC GAGGACATGG AAGCCGACGA GCAGCAGGCG
GTGCTCGAGG CGATGCAACC CGAAGATCGC GCCGCGATCG AGGATGCGCT TTCCTTCCCT
GAGGAATCGG CCGGCCGCCT GATGCAGCGC GACCTCGTCG CGGTGCCCGA GCATGTCACC
GTCGGCGACG TGATTGACCG GCTGCGCGAG GACGCCGACC TGACCAGCGA TTTCTGGGAA
ATCTTTGTCG TCGATCCGAT GCACCGGCCG GTCGGCTCCT GCCAGCTGAG CTGGATCCTC
CGCACCCCGC GCGACATTGC GATCAGCGAC GTGATGAGGC GCGAACAGAC GCTGATCCCC
GTCGACATGG ATCAGGAGGA GGTCGCACTG CGCTTTCAGA AATATGCGCT GATCTCCGCC
GCGGTCGTCG ACAAGGCGGG GCGCCTCGTC GGCATGATCA CGGTCGACGA CATCGTCCAC
ATCATCCAGG AAGAGGCGGG AGAGGATATA TTGCGCCTGT CGGGCGCAGG CGACGGCGAC
ATCAACGAGC CGATCCGTGA AACCTACACG GCGCGCGTGC GCTGGCTGAT CGCCAACCTC
GGCACCGCGC TCGTCGCATC GACCATCGTT GGCCTGTTCG GAGGCGCGAT CGAGCAGATG
GTCGCGCTTG CCGCGCTGAT GCCGATCGTC GCCGGGGTCG GCGGCAATGC GGGAACGCAA
ACGCTGGCCG TCACGGTGCG CGCGCTCGCG ATGAACCAGC TGACCGATTC GAACAGCTGG
CGCGCGATCT GGCGCGAAAT GACGATCGCG CTGCTCAACG GCGCGACGAT CGCGCTGGTG
GCGGGAACGG CAACCGCCCT GTGGTTCGCA AATCCGACGC TCGGCGCCGT TATTGGCGCG
GCGATGATCG TCAATATCTT CGTCGCGGGC GTCGCCGGGG TCGCGATCCC GCTATTGCTC
GACCGGCTCG ATCAGGACCC GGCGGTCGCC AGTTCGATCT TCGTGACGAT GACCACCGAT
TCGATGGGAT TTCTGGCCTT CCTCGGCCTC GCGGTGCTCA GTGGCCTGAC GACGTTATAG
 
Protein sequence
MDEREESQRP EDVAIAEERD DFPLETELDE DDRLKPDFVR DVIGLAEAGE GEAARERIGR 
LHPADIADLF ELARSDERPM LAAVLGDMLS ADVLAEMNDY VREELIDLLA PEQVAELASE
LDTDDAVAII EDMEADEQQA VLEAMQPEDR AAIEDALSFP EESAGRLMQR DLVAVPEHVT
VGDVIDRLRE DADLTSDFWE IFVVDPMHRP VGSCQLSWIL RTPRDIAISD VMRREQTLIP
VDMDQEEVAL RFQKYALISA AVVDKAGRLV GMITVDDIVH IIQEEAGEDI LRLSGAGDGD
INEPIRETYT ARVRWLIANL GTALVASTIV GLFGGAIEQM VALAALMPIV AGVGGNAGTQ
TLAVTVRALA MNQLTDSNSW RAIWREMTIA LLNGATIALV AGTATALWFA NPTLGAVIGA
AMIVNIFVAG VAGVAIPLLL DRLDQDPAVA SSIFVTMTTD SMGFLAFLGL AVLSGLTTL