| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1136 |
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| Symbol | |
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| ID | 4080881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1173516 |
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| End bp | 1174496 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009497 |
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| Product | hydroxymethylbutenyl pyrophosphate reductase |
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| Protein accession | YP_616185 |
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| Protein GI | 103486624 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.801481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.53937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC ATCATCCGAC GATGTCGGCG ACGACCCGCG ACGGCGCCCT GCTCAAGGTG
CTGATCGCGG CACCGCGCGG TTTTTGCGCG GGCGTCGACC GCGCGATCCG CATCGTCGAA
CTGGCGCTCG AACGGTTCGG TGCGCCGGTC TATGTCCGGC ACGAGATCGT CCACAACCGT
TATGTCGTCG AATCGCTGAA GGCGAAGGGC GCGATCTTCG TCGAATCGCT TGATCAGGTG
CCCGACGGCG TTCCCGTGGT TTTCAGCGCC CACGGCGTGC CGAAAGCGGT GCCCGCGAAG
GCCGAAATGC GGGGGCTCGA CTATATCGAC GCGACCTGTC CCCTGGTCTC GAAAGTGCAT
CGGCAGGCCG AGCGCGCGCA TGAAGCCGGT CGCCACATCA TTTTCATCGG CCATGCCGGT
CACCCGGAGG TTGTCGGGAC GCTCGGGCAA TTGCCCGATG GCGCAATGAC GCTGGTCGAA
TCGGTCGACG ATGTCGCCGC GCTGGCACCG GTCGATGAAG ACAGGCTTTC ATTTCTGACG
CAGACGACGC TCTCGGTCGA CGACACGCGC GACATCGTCG CCGCGCTGCG CCATCGCTTC
CCGGCCATCG CCGGGCCGCG CGGCGAGGAT ATTTGCTATG CGACCTCAAA CCGGCAGGAA
GCGGTCAAGG CCATTGCGGC ACGCTGCGAC CGGATGATCG TGATCGGCGC GCCGAACAGT
TCGAACAGCC TCCGGCTCGT CGAGGTGGCC GAGCGGCTCG GCACCCCGGC GCATCTCGTC
CAGCGCGGCC ACGACGTCGA CCCGGCGTGG CTTGATTCCA TCGGTACGCT CGGCATCACT
GCGGGGGCCA GCGCGCCCGA AACGCTGGTG CGCGAGGTCA TCGACGCGGT TTCCGCGGTG
CGCCCGATCG TCGAGGACGT CGTCGTGACC GCCGAGGAGA ATATGGTGTT CAAACTGCCG
CGCGGCCTCG AAGCTGCCTG A
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| Protein sequence | MNAHHPTMSA TTRDGALLKV LIAAPRGFCA GVDRAIRIVE LALERFGAPV YVRHEIVHNR
YVVESLKAKG AIFVESLDQV PDGVPVVFSA HGVPKAVPAK AEMRGLDYID ATCPLVSKVH
RQAERAHEAG RHIIFIGHAG HPEVVGTLGQ LPDGAMTLVE SVDDVAALAP VDEDRLSFLT
QTTLSVDDTR DIVAALRHRF PAIAGPRGED ICYATSNRQE AVKAIAARCD RMIVIGAPNS
SNSLRLVEVA ERLGTPAHLV QRGHDVDPAW LDSIGTLGIT AGASAPETLV REVIDAVSAV
RPIVEDVVVT AEENMVFKLP RGLEAA
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