Gene Sala_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1134 
Symbol 
ID4081494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1172105 
End bp1172557 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content65% 
IMG OID638009495 
Productribonuclease H 
Protein accessionYP_616183 
Protein GI103486622 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.326698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.475025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC GGCGTACGGT CATCGTCGCC ACCGACGGGG CGTGCAAGGG CAATCCAGGC 
CCCGGCGGCT GGGGTGCCGT CCTGCGCTGG GGCGAGGTGG TCAAGACATT GTCGGGAGGC
GAGGCCGACA CGACGAACAA CCGCATGGAA CTGATGGCGG CGATCGAGGC GCTCGCGGCG
CTCAAACGTC CGTGCAACGT CGAATTATCG ACCGACAGCG TCTACGTCCG CGACGGTATC
ACCAAATGGA TCTTCGGCTG GCAGAAAAAC GGCTGGAAAA CCGCCGCGAA AAAACCCGTT
GCCAACGCCG ACCTGTGGCA ACGACTGATC AAGGAGGCCG CGCGGCACAA GGTCGAATGG
CTGTGGGTCA AGGGCCATGC CGGGCACGGC GACAATGAAC TCGCCGACCA GCTCGCCAGC
GACGCTGCGC TGAAAATGGC GCGGGCGCGC TGA
 
Protein sequence
MSERRTVIVA TDGACKGNPG PGGWGAVLRW GEVVKTLSGG EADTTNNRME LMAAIEALAA 
LKRPCNVELS TDSVYVRDGI TKWIFGWQKN GWKTAAKKPV ANADLWQRLI KEAARHKVEW
LWVKGHAGHG DNELADQLAS DAALKMARAR