Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1134 |
Symbol | |
ID | 4081494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1172105 |
End bp | 1172557 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009495 |
Product | ribonuclease H |
Protein accession | YP_616183 |
Protein GI | 103486622 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.326698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.475025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGC GGCGTACGGT CATCGTCGCC ACCGACGGGG CGTGCAAGGG CAATCCAGGC CCCGGCGGCT GGGGTGCCGT CCTGCGCTGG GGCGAGGTGG TCAAGACATT GTCGGGAGGC GAGGCCGACA CGACGAACAA CCGCATGGAA CTGATGGCGG CGATCGAGGC GCTCGCGGCG CTCAAACGTC CGTGCAACGT CGAATTATCG ACCGACAGCG TCTACGTCCG CGACGGTATC ACCAAATGGA TCTTCGGCTG GCAGAAAAAC GGCTGGAAAA CCGCCGCGAA AAAACCCGTT GCCAACGCCG ACCTGTGGCA ACGACTGATC AAGGAGGCCG CGCGGCACAA GGTCGAATGG CTGTGGGTCA AGGGCCATGC CGGGCACGGC GACAATGAAC TCGCCGACCA GCTCGCCAGC GACGCTGCGC TGAAAATGGC GCGGGCGCGC TGA
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Protein sequence | MSERRTVIVA TDGACKGNPG PGGWGAVLRW GEVVKTLSGG EADTTNNRME LMAAIEALAA LKRPCNVELS TDSVYVRDGI TKWIFGWQKN GWKTAAKKPV ANADLWQRLI KEAARHKVEW LWVKGHAGHG DNELADQLAS DAALKMARAR
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