| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1068 |
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| Symbol | |
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| ID | 4082333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1100283 |
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| End bp | 1101599 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009429 |
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| Product | adenylosuccinate lyase |
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| Protein accession | YP_616118 |
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| Protein GI | 103486557 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0025797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCCGC GTTATGCACG GCCGGAAATG ACGGCGATCT GGTCGGCGGA GAATCGCTTC
TCCATCTGGT TCGAGATCGA AGCCCACGCG ACCGACGCGC TCGCCGAACT CGGCACCGTG
CCCCCATCGG CGGCAAAGGC GCTGTGGGAC TGGTGGGCGA CCAGGCCTGC GATCGACGTC
GCTGCAATCG ACGCGATCGA GGCCGTGACC AAGCATGACG TCATCGCCTT CCTTACCTGG
GTTGCCGAAA ATGTCGGCGA GGAAGCGCGC TTCATGCACC AGGGCATGAC CAGCTCCGAC
GTGCTCGACA CCTGCCTCGC GGTCCAGCTG GCGCAGGCCG CCGACATATT GCTCGCGGAC
CTCGAGGCGC TGCTCGCCGC GATCAAGCGC CGCGCGTTCG AGCACAAGCT CACCCCGACG
ATCGGGCGCA GCCACGGCAT CCACGCCGAG CCCGTCACCT TCGGGCTCAA GATGGCCGAA
GCCTATGCCG AGTTTTCGCG TTGCAAGGCG CGGCTCCAGA CGGCGCGCGC CGAAATCGCG
ACCTGTGCCA TTTCCGGCGC GGTCGGCACC TTCGCCAATA TCGATCCGCG CGTCGAAGCG
CATGTCGCCG CCAAGCTGGG CCTGTCGATC GAGCCCGTCT CGACGCAGGT GATCCCGCGC
GACCGTCACG CGATGTTCTT CGCGGTGCTC GGCGTGATCG CCTCGTCGAT CGAGCGGCTT
GCGGTCGAGG TGCGCCACCT TCAGCGCACC GAAGTGCTGG AGGCAGAAGA GTATTTTTCG
CCGGGCCAGA AAGGTTCGTC GGCGATGCCG CACAAGCGCA ATCCCGTGCT CACCGAGAAC
CTCACCGGCC TTGCCCGCAT GGTGCGCAGC GCGGTCACGC CCGCGATGGA GAATGTCGCG
CTGTGGCACG AACGCGACAT CAGCCATTCG TCGGTCGAAC GCTTCATCGG CCCCGACGCG
ACGATCACGC TCGACTTCGC GCTCGCGCGC CTCACCGGGG TCATCGACAA GCTGCTCGTC
TATCCCGACC GGATGCAGAA AAATCTCGAT CGCATGGGCG GGCTCGTTCA TTCGCAGCGG
GTGCTGCTGG CGCTGACGCA GGCGGGCGCC AGCCGCGAAG ACAGCTATGC GCTCGTCCAG
CGCAACGCGA TGAAAGTATG GGAAAGCGAC GGCCAGCTCT CGCTGCTCGA ACTGCTCAAG
TCCGACGCCG ACGTCACCGC GCGCCTGTCG GCCGATCAAC TCACGGAACT TTTCGACCTC
GACTATCATA TGAAGCATGT GGACACGATC TTCGACCGGG TGTTCGGCGC CGCCTAG
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| Protein sequence | MVPRYARPEM TAIWSAENRF SIWFEIEAHA TDALAELGTV PPSAAKALWD WWATRPAIDV
AAIDAIEAVT KHDVIAFLTW VAENVGEEAR FMHQGMTSSD VLDTCLAVQL AQAADILLAD
LEALLAAIKR RAFEHKLTPT IGRSHGIHAE PVTFGLKMAE AYAEFSRCKA RLQTARAEIA
TCAISGAVGT FANIDPRVEA HVAAKLGLSI EPVSTQVIPR DRHAMFFAVL GVIASSIERL
AVEVRHLQRT EVLEAEEYFS PGQKGSSAMP HKRNPVLTEN LTGLARMVRS AVTPAMENVA
LWHERDISHS SVERFIGPDA TITLDFALAR LTGVIDKLLV YPDRMQKNLD RMGGLVHSQR
VLLALTQAGA SREDSYALVQ RNAMKVWESD GQLSLLELLK SDADVTARLS ADQLTELFDL
DYHMKHVDTI FDRVFGAA
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