Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1065 |
Symbol | |
ID | 4082330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1098420 |
End bp | 1099061 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009426 |
Product | phosphoribosylanthranilate isomerase |
Protein accession | YP_616115 |
Protein GI | 103486554 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0135] Phosphoribosylanthranilate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.660088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCAA CAATGTCCCC TCTCGTCAAA ATCTGCGGCC TTACCACGCC TGAAAGCGTC GATGCCGCCA TCCGCCTCGG CGCGACGCAC ATCGGCCTTG TGCATTATGA GCCAAGCCAG CGGCACGTCG ACCTCAGGAC CGCGGCCGAG CTCCGCAAGC GCGCGGGTCC GCACGTCAAG GTCGCGCTGC TGCTCGTCAA CGCCTCGCAG CAACTGACCG GCGAGGCGCT TAGCATGGTG CGCCCCGACA TCGTCCAGTT CCACGGCAGC GAGACCCCCG AATGGCTGAC AGTGGTCAAA CGGCTGACCC CCGCCGAAAT CTGGAAGGCG ATCGGGCTCA AGGACGCCGA AACGCTGACC CGGATGCAGA AATATCACGG GATTGCCCAC CGCATCCTGT TCGACGCACC CGCCGCCGCG CTGCCCGGGG GCACCGGCAC GCGCTTCGAC TGGTCGCTGC TGAAAAATCA CCGGCATACA ATGGATTGGG GTATCGCAGG CGGTCTGACC CCCGCCAATG TCGCCCAGGC GATTGCCGAA ACCGGCGCGC CGCTCGTCGA TGTCTCGTCG GGCGTCGAAA GCGCGCCGGG CGTCAAGGAT ATGGACAAGA TCGCCGCTTT CCTTAAAGCG GTCGGCAGAT GA
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Protein sequence | MRPTMSPLVK ICGLTTPESV DAAIRLGATH IGLVHYEPSQ RHVDLRTAAE LRKRAGPHVK VALLLVNASQ QLTGEALSMV RPDIVQFHGS ETPEWLTVVK RLTPAEIWKA IGLKDAETLT RMQKYHGIAH RILFDAPAAA LPGGTGTRFD WSLLKNHRHT MDWGIAGGLT PANVAQAIAE TGAPLVDVSS GVESAPGVKD MDKIAAFLKA VGR
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