Gene Sala_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1065 
Symbol 
ID4082330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1098420 
End bp1099061 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content65% 
IMG OID638009426 
Productphosphoribosylanthranilate isomerase 
Protein accessionYP_616115 
Protein GI103486554 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.660088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCAA CAATGTCCCC TCTCGTCAAA ATCTGCGGCC TTACCACGCC TGAAAGCGTC 
GATGCCGCCA TCCGCCTCGG CGCGACGCAC ATCGGCCTTG TGCATTATGA GCCAAGCCAG
CGGCACGTCG ACCTCAGGAC CGCGGCCGAG CTCCGCAAGC GCGCGGGTCC GCACGTCAAG
GTCGCGCTGC TGCTCGTCAA CGCCTCGCAG CAACTGACCG GCGAGGCGCT TAGCATGGTG
CGCCCCGACA TCGTCCAGTT CCACGGCAGC GAGACCCCCG AATGGCTGAC AGTGGTCAAA
CGGCTGACCC CCGCCGAAAT CTGGAAGGCG ATCGGGCTCA AGGACGCCGA AACGCTGACC
CGGATGCAGA AATATCACGG GATTGCCCAC CGCATCCTGT TCGACGCACC CGCCGCCGCG
CTGCCCGGGG GCACCGGCAC GCGCTTCGAC TGGTCGCTGC TGAAAAATCA CCGGCATACA
ATGGATTGGG GTATCGCAGG CGGTCTGACC CCCGCCAATG TCGCCCAGGC GATTGCCGAA
ACCGGCGCGC CGCTCGTCGA TGTCTCGTCG GGCGTCGAAA GCGCGCCGGG CGTCAAGGAT
ATGGACAAGA TCGCCGCTTT CCTTAAAGCG GTCGGCAGAT GA
 
Protein sequence
MRPTMSPLVK ICGLTTPESV DAAIRLGATH IGLVHYEPSQ RHVDLRTAAE LRKRAGPHVK 
VALLLVNASQ QLTGEALSMV RPDIVQFHGS ETPEWLTVVK RLTPAEIWKA IGLKDAETLT
RMQKYHGIAH RILFDAPAAA LPGGTGTRFD WSLLKNHRHT MDWGIAGGLT PANVAQAIAE
TGAPLVDVSS GVESAPGVKD MDKIAAFLKA VGR