| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1045 |
|---|
| Symbol | |
|---|
| ID | 4080770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1077650 |
|---|
| End bp | 1078570 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638009405 |
|---|
| Product | cysteine synthases |
|---|
| Protein accession | YP_616095 |
|---|
| Protein GI | 103486534 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.801481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCA ATTCCATCCT CGAAACCATC GGCAACACGC CGCACATTCG CATGGCAAAG
CTTTTTCCCG ACGCCGAAGT CTGGGTAAAA TCGGAACGCA GCAACCCCGG CGGCTCGATC
AAGGACCGCA TCGGCCTGGC GATGATCGAG GCGGCCGAAC GCGACGGCAG CCTGAAGGAA
GGCGGAACGA TCGTCGAGCC GACCTCGGGC AATACCGGCA TCGGACTTGC GATGGCCGCG
GCGGTCAAGG GCTACAAGCT CGTGCTCGTC ATGCCCGAAT CGATGTCGCT CGAACGCCGT
CGGCTGATGC TTGCCTATGG CGCGACCTTT GACCTCACGC CGCGCGAAAA GGGCATGAAG
GGAGCGATCG AGCGCGCGAT CGAACTCGTC GAGACGACCC CCGGCGCCTG GATGCCGCAG
CAGTTCGAAA ATGAAGCCAA CATCGACGTC CATATCCGCA CCACCGGCCC CGAAATCCTT
GCCGATTTCC GGGATACGCC GATCGACGTG CTCGTCACCG GCGTCGGCAC CGGCGGCCAT
ATCACCGGCT GCGCGCAATT CCTGAAAGAG CATTGGCCGA ACCTCAAGGT CTTCGCGGTC
GAACCCGAAG CCTCACCGGT CATTTCGGGC GGCCAGCCCG CGCCGCACCC GATCCAGGGT
ATCGGTGCCG GCTTCATCCC GCGCAACCTC CACACCGACC TGCTCGACGG CGTCATCAAG
GTCGATGCTT CCGCCGCAAA GGACATGGCA CGCCGCGCCG CGACCGAGGA AGGGATGCTC
GTCGGCATCT CGTCGGGCGC CACGCTCGCC GCGATCGCGC AGAAGCTCGC CGAACTGCCG
CCGGGCAGCC GCGTACTCGG TTTCAACTAC GACACCGGCG AGCGTTATCT GTCGGTGCCC
GACTTCCTGC CCGAAATCTG A
|
|---|
| Protein sequence | MKANSILETI GNTPHIRMAK LFPDAEVWVK SERSNPGGSI KDRIGLAMIE AAERDGSLKE
GGTIVEPTSG NTGIGLAMAA AVKGYKLVLV MPESMSLERR RLMLAYGATF DLTPREKGMK
GAIERAIELV ETTPGAWMPQ QFENEANIDV HIRTTGPEIL ADFRDTPIDV LVTGVGTGGH
ITGCAQFLKE HWPNLKVFAV EPEASPVISG GQPAPHPIQG IGAGFIPRNL HTDLLDGVIK
VDASAAKDMA RRAATEEGML VGISSGATLA AIAQKLAELP PGSRVLGFNY DTGERYLSVP
DFLPEI
|
|---|
| |