| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1008 |
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| Symbol | |
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| ID | 4081696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1033569 |
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| End bp | 1035065 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638009368 |
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| Product | carotenoid oxygenase |
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| Protein accession | YP_616058 |
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| Protein GI | 103486497 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0158946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.495511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCC AGCTTGTCGA AACGATCCAG TCGACGCTTC AGCCGAACGA CCATCCCTAT
ATGCAGGGTG CGTGGCGTCC GACCTATAAT GAGTGGAACG CGATATTTTC CAATGGCGAT
GCCGAGGTGA TCGGGACGAT CCCCGATGAC ATCGACGGCG TCTATGTTCG CACCGGCGAG
AACCAGATTC ACGAGCCGAT CGGCCGTTAC CACCCCTTCG ACGGCGATGG TTTCATTCAC
GCCATCTCGT TCAAAGGAGG CCGCGCGAGC TATCGCAGCC GCTTCGTGCG GACCAAGGGA
TTCGCGGCCG AGAAGGAAGC CGGGCGTTCG TTATGGGCGG GCCTGATGGA GCCGCCGCAC
AAGTCGACGC GCCCCGGCTG GGGGGCGCAG GAGTGGCTCA AGGATTCCTC CTCGACCGAT
GTGGCGATCC ATGCGGGGAA GATCATCTCG ACCTTCTATC AGTGCGGCGA AGCCTACCGG
CTCGATCCCT TCACGCTCGA ACAGTTCGGC ACCGAAAGCT GGGTGCCGCT CGACGGCATT
TCGGCGCATT GCAAGGTCGA CCTCGCGACG GGCGAGCTGA TGTTCTTCAA TTACTCGAAA
CACGCCCCCT ACATGCACTA CGGTGTCGTC GGCGCGGACA ACAAGCTCAA ACATTATATC
CCGGTGCCGC TGCCCGGACC ACGGCTGCCG CACGACATGG CGTTCACCGA ACATTACACG
ATCCTCAACG ACATGCCGCT CTATTGGAAT GAGGAGCTGC TCAAAAAGAA TCTGCACGTC
GTCCAGTTCC ACCCCGACCA GAAAACGCGC TTCGCGATCA TCCCGCGCCA CGGCCAGCCC
GAAGACATCC GCTGGTTCGA GGCCGAGCCG ACCTACACGC TCCACTGGCT CAACGCCTGG
GAGGAAGGCG ACGAGATCAT CCTCGACGGC TATTATCAGG AAGAGCCGAT GCCCAAATCC
TATCCGAACG CGCCCGAGGG GCTCGAACGG ATGATGGCCT ATCTCGATCA GGGGCTTTTG
AAGCCGCGCC TCCACCGCTG GCGCTTCAAC CTCAAGACCG GCGCGACGGT CGAGGAGCGG
CTTGACGACC GCGATCTTGA GTTCGGCATG TTCAATCATC GCTACGCGGG CAAGCCCTAT
CGCTACGCCT ATAGCGCGAT CCCCGAGCCC GGCTGGTTCC TGTTTCGCGG GATCGTCAAG
CACGATCTCG ATTCCCGGAC GAGCGAGGCA TATGAGTTCG GCCGCGGTCG TTTCGGCAGC
GAGGCACCGT TCGCGCCGCG CATCGGCGCC AGGGACGAGG ACGACGGCTA CCTCGTATCC
TTCATCGCGG ATCTTGAAAC CGACCAGTCC GAATGCGTGC TGATCGACGC GAAGAATATA
ACGGCGGGGC CGGTGTGCCG GATCATCCTG CCCGAGCGCA TCTGTTCGGG CACGCACAGC
GTGTGGGCGA GCGGCAATGA TATCGGCATG GGCGAAAACA GCGTGCTGGC CGCCTGA
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| Protein sequence | MTAQLVETIQ STLQPNDHPY MQGAWRPTYN EWNAIFSNGD AEVIGTIPDD IDGVYVRTGE
NQIHEPIGRY HPFDGDGFIH AISFKGGRAS YRSRFVRTKG FAAEKEAGRS LWAGLMEPPH
KSTRPGWGAQ EWLKDSSSTD VAIHAGKIIS TFYQCGEAYR LDPFTLEQFG TESWVPLDGI
SAHCKVDLAT GELMFFNYSK HAPYMHYGVV GADNKLKHYI PVPLPGPRLP HDMAFTEHYT
ILNDMPLYWN EELLKKNLHV VQFHPDQKTR FAIIPRHGQP EDIRWFEAEP TYTLHWLNAW
EEGDEIILDG YYQEEPMPKS YPNAPEGLER MMAYLDQGLL KPRLHRWRFN LKTGATVEER
LDDRDLEFGM FNHRYAGKPY RYAYSAIPEP GWFLFRGIVK HDLDSRTSEA YEFGRGRFGS
EAPFAPRIGA RDEDDGYLVS FIADLETDQS ECVLIDAKNI TAGPVCRIIL PERICSGTHS
VWASGNDIGM GENSVLAA
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