| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0993 |
|---|
| Symbol | |
|---|
| ID | 4081681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1018327 |
|---|
| End bp | 1018740 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638009353 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_616043 |
|---|
| Protein GI | 103486482 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02044] Cu(I)-responsive transcriptional regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.335093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG GCGAGCTGTC GCGTGCCACC GGCACCAACA TCGAAACCAT CCGCTATTAT
GAGCGCATCG GCCTGCTTCC CGCGCCCGCG CGCACCGCGG GCAATTACCG CAGCTATGGC
GACGCGCACC GCGCGCGGCT CCGCTTCGTG CGCCATTCGC GCGAACTGGG CTTTACCATC
GAGGAGATCC GCTCGCTGCT CGACCTGTCC GACGATCCCG CGCGCGATTG CGGCGAGGCC
GACCGCATCG CGACGCGGCA TCTGAACCAA GTGGAAGCGA AGATTGCGCA GCTCACCCTG
CTGCGCGACG AACTCAAGCG CATCGTCGGG CGCTGCCGCG GCGGCGTCGC CGCCGACTGC
CGCGTGATCG AGGCGCTGGG CGACCATCGC CACTGCGAAA GCGCGCACAT CTGA
|
|---|
| Protein sequence | MKIGELSRAT GTNIETIRYY ERIGLLPAPA RTAGNYRSYG DAHRARLRFV RHSRELGFTI
EEIRSLLDLS DDPARDCGEA DRIATRHLNQ VEAKIAQLTL LRDELKRIVG RCRGGVAADC
RVIEALGDHR HCESAHI
|
|---|
| |