Gene Sala_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0953 
Symbol 
ID4082452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand- 
Start bp977924 
End bp978505 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content69% 
IMG OID638009314 
Productnitroreductase 
Protein accessionYP_616004 
Protein GI103486443 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.102151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACG ACAACTCCTC GCTCCTCGCC CATCTCGCCA CCCGCCGTTC GGGCAAGGCG 
CGCGACATGG TGGCGCCCGG CCCCGACGCC GCGCAGCTCC GCGCCATCAT CGAGCTTGCG 
CTGCGCACCC CCGACCATGG CAAGCTCGCC CCCTGGCGCA TCGTCACCGT CGCCGACGAC 
CAGCGCGCGG CTTTCGCGGC GCTGCTCAAG GAAGCGTGGG TCAAGGAGAA TCCCGGCGCC 
GCGGGCATGG ATCTCTCCGC GCTCGATCAG TTCGCGCACC AGGCGCCCAC CCTGCTCGTG 
CTGCTCTCCA CCCCTGTGAA GGGGGCCAAA ATCCCGCTGT GGGAGCAACG GATGTCGGCG 
GGCGCGGTGG GCATGAACCT GCTCCACGCC GCGCACGCGC ACGGCTTCGT CGGCAGCTGG 
CTCACCGGCT GGGCCGCCTA CAGCCCCGAC GTTGCCGCGG CGTTCGGCGC GGGCGAGGGC 
GACACCATCG TTGGCTATTT CTTCCTCGGC ACCGCGAACG CCCCGCTATC CGAACGACCA 
AGGCCCGAAT ATGACGAGGT TGTTCGCGCC TGGGACATTT AA
 
Protein sequence
MFNDNSSLLA HLATRRSGKA RDMVAPGPDA AQLRAIIELA LRTPDHGKLA PWRIVTVADD 
QRAAFAALLK EAWVKENPGA AGMDLSALDQ FAHQAPTLLV LLSTPVKGAK IPLWEQRMSA 
GAVGMNLLHA AHAHGFVGSW LTGWAAYSPD VAAAFGAGEG DTIVGYFFLG TANAPLSERP 
RPEYDEVVRA WDI