| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0946 |
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| Symbol | |
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| ID | 4082445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 966467 |
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| End bp | 967975 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638009307 |
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| Product | PepSY-associated TM helix |
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| Protein accession | YP_615997 |
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| Protein GI | 103486436 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.553628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGCGAC GCCGACGGCA ATGCGATGGC GCTGCTCCTC CTGCCCCTCC TCTGGGGCAT
CCTCGCCTTC TGGCTGCTCA TGCTGCCGCG CCGGCGTTCG CAATACACGC TGCTCGCCTT
TCCCGCCGCC GCCGGGCTCG GCCTGATTTT CGTCGGAGGC GCCCTGTGAC CCTCGCTTTT
TCCAAGGACG CAGTGCAGCG TGCGTTGTCG GGCCACGCCG CGATCGGCCT GCTTGCCTCG
GCGCTGCTCT ATCTCATCTG CCTCACCGGC ACCGTCGTTG TTTTCTATCA GGAATGGCAG
CGCATCGAAC AGCCGAATGC CCCCGAAATG GCGGCGATCG CCCCCGACGC GGTGCAGCGC
GCCGTCGCCG CGGTGCTCGC GAGCGAAAAG GGCAAGCCCG CCACGACGCA CCTCTATGTC
CATATGCCGG TCGGCGGCCT GCCGCGCACG ACGATCACCA CCGACCATCA GGCGGTGCAC
ATCGACGCCG ATGGCAGGAT CGCCATGCCC GAGGAGAATG CCTGGTCGGA GTTTCTGCTC
CACGCCCATT ATTCGCTCAA CATTCCGGGC CTTGTCGGCA TGACGATCGT CGGCATCTTC
GGCGTGATGA TCCTCGCGCT CACGCTGTCG GGCATCGTCG CGCACCCGCG CATCTTCCGC
GACGCCTTTC GCCTCCGCGC GCGCGACAAT CATGGCGTCG GCCTCGCCGA CTGGCACAAC
CGGCTGAGCG TCTGGACCCT GCCCTTTTCG CTCGCGATCG CGCTGACCGG CGCGATGATC
GGGCTTGGCG TCGTCGGCGC CCATGGCCTC GCCGCCGCCT TCTACAACAA TGACGTCGAG
GCCGCCTATG CGCCGATCTT CGGCGAGGAA CATGGCGCCG ACGCCCGCCC CGCGCCGCTC
GCCAATGTCG CCGCGCCGCT CGCCTGGCTC GCCAGGAACC ACCCCGAAGT GCGCCCGACC
TACGTCATCC TCCACGATCC ACAGACGCGC GGCCAGCATA TCCAGCTCAT CGCCGAACAT
CCGCGCCGCC TGATCTACGG CGAAACCTAT CAGTTCGGCG CCGACGGCGG CTATCATGGC
AAGGTCGGCC TGTCCGACGG GCATATGGGG CAACAGCTCG CCGCCTCGAC CTACAACCTG
CATTTCGGCA ATTACGGCGG CCTCCCGGTC AAGCTCGCCT ATATCGTCTT CGGCCTCGCA
CTCACCATCG TCGTCGCCAC GGGCACCTCG ATCTGGCTCG GCAAAAGGCA GCGGCGCGGC
CTCCACGAGC CGCGGCTGCG CGCGGGCTGG GACGGCGTCA TCTGGGGCGT CCCGCTTGCC
CTCACCCTCA CCTTCCTCGC GCGGCTCCTC ATCGGCAACG GCGCGCCGCT GATCGCGATC
TTCTGGACGC TGACAATCGC AATCCCGTTG CTCGCGATCG CCTTCGCGGC AAGGCGCCCC
AAACGGCTGC TGCAATATCT GCTGTGCGGA TCGCTCGCGC TGGCGCTGGC AAGCTGGTCC
GTCGTGTAG
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| Protein sequence | MERRRRQCDG AAPPAPPLGH PRLLAAHAAA PAFAIHAARL SRRRRARPDF RRRRPVTLAF
SKDAVQRALS GHAAIGLLAS ALLYLICLTG TVVVFYQEWQ RIEQPNAPEM AAIAPDAVQR
AVAAVLASEK GKPATTHLYV HMPVGGLPRT TITTDHQAVH IDADGRIAMP EENAWSEFLL
HAHYSLNIPG LVGMTIVGIF GVMILALTLS GIVAHPRIFR DAFRLRARDN HGVGLADWHN
RLSVWTLPFS LAIALTGAMI GLGVVGAHGL AAAFYNNDVE AAYAPIFGEE HGADARPAPL
ANVAAPLAWL ARNHPEVRPT YVILHDPQTR GQHIQLIAEH PRRLIYGETY QFGADGGYHG
KVGLSDGHMG QQLAASTYNL HFGNYGGLPV KLAYIVFGLA LTIVVATGTS IWLGKRQRRG
LHEPRLRAGW DGVIWGVPLA LTLTFLARLL IGNGAPLIAI FWTLTIAIPL LAIAFAARRP
KRLLQYLLCG SLALALASWS VV
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