| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0925 |
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| Symbol | |
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| ID | 4080478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 938653 |
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| End bp | 939111 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638009286 |
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| Product | Holliday junction resolvase YqgF |
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| Protein accession | YP_615976 |
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| Protein GI | 103486415 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.233016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCA CCGCCGCCCC CGACTTTGCC GCCGCGCTCC CGAACGGCGG CCGCCTCGCG
GGGCTTGATG TCGGCACCAA AACGATAGGC GTTGCGCTGT GCGATGCGGG ATGGTCGTTC
GCTTCGCCCG ACAAGACGAT CGTGCGCAAG AGATTTTCGG CCGATCTCGA CGCGCTCAAG
GCACTCGTCG CCGGGCAGGC GGTGGTCGGG CTGGTCGTCG GCCTGCCGCT CAACATGGAC
GGCAGCGACA GCCCGCGCAC GCAGAGTACG CGCGCCTTCG CACGCAATCT GGCGCCGCTC
GGCCTGCCCG TGCTGCTGTG GGACGAACGC TGGTCGACCG CGGCGGTCGA ACGCGCGATG
ATCGCCGCCG ACGTCAGTCG CGCCAAACGC GCGGAGCGTA TCGACAGCGC CGCGGCGGCG
TTCATATTGC AGGGTGCAAT CGACGCGATG ACGCGCTGA
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| Protein sequence | MITTAAPDFA AALPNGGRLA GLDVGTKTIG VALCDAGWSF ASPDKTIVRK RFSADLDALK
ALVAGQAVVG LVVGLPLNMD GSDSPRTQST RAFARNLAPL GLPVLLWDER WSTAAVERAM
IAADVSRAKR AERIDSAAAA FILQGAIDAM TR
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