Gene Sala_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0905 
Symbol 
ID4083115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp914982 
End bp915389 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content63% 
IMG OID638009266 
Producthypothetical protein 
Protein accessionYP_615956 
Protein GI103486395 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00718711 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGC GAACCCTTCC GGTGATCGAC CGGGACAATG AAGCTTTCTG GACCTGGGGG 
CGCGAGGGGA AGCTTGCCAT CCATCGCTGC GCGAATTGCG CCTGTTTCGT GCATCCGCCG
GTCCCGTTCT GTCCCTGTTG CGAAAGCCGC GACGTCGCGC CGCAGCCTGT GTCGGGGCGC
GGCCGAATCG TTACCTTCAC CGTCAATCAC AAGCCCTGGG TGCCTGATAT TTCCGCGCCC
TATGTCCTTG CGCTCGTGGC GATCGAGGAA CAGGACGATG TGCGCCTTGC CACCAACATC
ATCGGCTGCG CGGCCGAAGA TGTGCGCTTC GACATGGAGG TGGAGGTCGT TTTCGAGGCG
GCTGAGGACC TGTGGATCCC GCTTTTTCGT CCGGTGCCGT CGGCATGA
 
Protein sequence
MLTRTLPVID RDNEAFWTWG REGKLAIHRC ANCACFVHPP VPFCPCCESR DVAPQPVSGR 
GRIVTFTVNH KPWVPDISAP YVLALVAIEE QDDVRLATNI IGCAAEDVRF DMEVEVVFEA
AEDLWIPLFR PVPSA