| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0887 |
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| Symbol | |
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| ID | 4082787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 894248 |
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| End bp | 895498 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638009248 |
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| Product | major facilitator transporter |
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| Protein accession | YP_615938 |
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| Protein GI | 103486377 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.160597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCGG ATACAGGCAG TCGGCGCGGC ATTACCCTGG CGCTGCTCGC CGTGGTGGCG
ATCGTTTCCT ATGTGGACCG GCAGGTGTTC ACGCTGTTCC AGGACGACAT CAAGGTCGAA
TTGGGACTGA CCGACGGGCA GCTCGGTCTG CTTACAGGGA TCGCCTTTGC CGCCTTTTAT
GCGCTCGCGG CCTTTCCCAT CGCGCGTTAC GCGGATCGCG GGGATCGCCG GTTGGTCATC
GCGCTATGCG TGTCTTTCTG GAGTCTGGCG ACGATTGCCT GCGGCATGGC GCAGAATTTC
TGGCAGATGA TGCTGGCGCG CATCGGCCTG GCGGCCGGGG AGGCCGGGGC GGGACCGGCG
GGCAATTCGC TGCTGGTCGA AATCTTTCCG AAGGAACGCC GTACCACCGT CATCTCGACC
ATGCTGGCGG CCAATGCGAT CGGCCTGTCA GGCGGCCTCG CCCTCGCGGG GTGGCTCGGC
CAATGGTATG ACTGGCGCGC CGTTTTCGTG ATTGTCGGCG CACCCGGTAT CTTGCTGGGC
CTCGTCGTCT GGATGTTTGC CGCCGAACCG CGGCGGCGCA GCGGCCCCGC GCCCGAGATG
CCGCCGCAAA CCAGCCTTGG CGAGGTATTG CGGACAATCG CCGGCAATAG GTCGCTGCGC
TGGGTTGGCC TGTTGCTGTC GATGGTTCCG GTTGCCGGTT TCGGCTTCAT TTTGTGGGGA
GCATCCTTCT TCCGCCGCGT CCACGAAATG GACCGGGCGG AAACCGGATT CTGGCTGGGC
GGAGCAATGG CGATCGGACT GGTCGTCGGC AATTTGTTCG CAGGCTGGTT CAGCGATCGC
TATGGCAAGG CGAACCCGCG CTTCAACGGC GGGTTCGCGG GCATTGGCTT GCTGATTTCC
TTTCCGTTCG GCTTGACCTT CGCTTTGACC GACAGCGCCT ATCTCGCGCT CGCCTGCTTC
GTCGTCGTCA AATTCATGAT GACATTGCAC CTCGGCCCGA TCATCGCGCT CAGCTTCGCG
CAGGTGCCGG GCCATATGCG GGCGATGATG TCGGCCACGA TCAACATGAT GATCGGCCTG
GCTGGAGTCG GGTTGGGCGG TACGGTTGCC GGGCTGCTGA GCGAATATTT CATGCCCGAA
TATGGCGATC TGTCGCTCCA GCCGGCGCTG GCTGTCCTGT CGGTTTGCCT GCTGGTGGGC
GGCGTAGCTG CGATCATGGC GGGCCGGACG GCGAAACCGA TCGAAGAATA G
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| Protein sequence | MKADTGSRRG ITLALLAVVA IVSYVDRQVF TLFQDDIKVE LGLTDGQLGL LTGIAFAAFY
ALAAFPIARY ADRGDRRLVI ALCVSFWSLA TIACGMAQNF WQMMLARIGL AAGEAGAGPA
GNSLLVEIFP KERRTTVIST MLAANAIGLS GGLALAGWLG QWYDWRAVFV IVGAPGILLG
LVVWMFAAEP RRRSGPAPEM PPQTSLGEVL RTIAGNRSLR WVGLLLSMVP VAGFGFILWG
ASFFRRVHEM DRAETGFWLG GAMAIGLVVG NLFAGWFSDR YGKANPRFNG GFAGIGLLIS
FPFGLTFALT DSAYLALACF VVVKFMMTLH LGPIIALSFA QVPGHMRAMM SATINMMIGL
AGVGLGGTVA GLLSEYFMPE YGDLSLQPAL AVLSVCLLVG GVAAIMAGRT AKPIEE
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