Gene Sala_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0815 
Symbol 
ID4080461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp819647 
End bp820132 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content69% 
IMG OID638009175 
Productprotein tyrosine phosphatase 
Protein accessionYP_615867 
Protein GI103486306 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.265223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00104301 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCAAGG ACGGTAAGGT GCGGCCAGCA ATTTTGTTCC TGTGTCTCGG CAACATCTGC 
CGCTCGCCGC TCGGCGAGGG CGCGGCGCGT GCGGCCTTCG CCGCTGCGGG GATCGACGCG
CATATCGATT CGGCGGGGAC GGGCAACTGG CATGTCGGCC ATCCGCCCGA TCGCCGGGCA
CAGGCCGAGG CGCAGCGCCG CGGCATCGAC ATTTCGGGCC TGCGCGCGCG CCAGCTCGTC
CGTGACGATT TTTACCGCTT CGACCTGATC CTTGCCGCCG ATGAAAGCAA TCTGCGCGAC
GCGCTGGCAA TCCGCCCCGA CGACGCGACC GCCGAGCTAT GCCTGATGCT CGACCTCGTT
GCCGGACGCG CGGGGCAGGG GGTGACCGAT CCCTATTATG GCTCGGACGA GGGCTTTGCC
GCGACGTGGG AGGATGTGGC GGCGGTCGCT TCGGCGCTCG CCGCGCGCTG GTCGACGAGC
GGATAG
 
Protein sequence
MGKDGKVRPA ILFLCLGNIC RSPLGEGAAR AAFAAAGIDA HIDSAGTGNW HVGHPPDRRA 
QAEAQRRGID ISGLRARQLV RDDFYRFDLI LAADESNLRD ALAIRPDDAT AELCLMLDLV
AGRAGQGVTD PYYGSDEGFA ATWEDVAAVA SALAARWSTS G