Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0815 |
Symbol | |
ID | 4080461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 819647 |
End bp | 820132 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638009175 |
Product | protein tyrosine phosphatase |
Protein accession | YP_615867 |
Protein GI | 103486306 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.265223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00104301 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCAAGG ACGGTAAGGT GCGGCCAGCA ATTTTGTTCC TGTGTCTCGG CAACATCTGC CGCTCGCCGC TCGGCGAGGG CGCGGCGCGT GCGGCCTTCG CCGCTGCGGG GATCGACGCG CATATCGATT CGGCGGGGAC GGGCAACTGG CATGTCGGCC ATCCGCCCGA TCGCCGGGCA CAGGCCGAGG CGCAGCGCCG CGGCATCGAC ATTTCGGGCC TGCGCGCGCG CCAGCTCGTC CGTGACGATT TTTACCGCTT CGACCTGATC CTTGCCGCCG ATGAAAGCAA TCTGCGCGAC GCGCTGGCAA TCCGCCCCGA CGACGCGACC GCCGAGCTAT GCCTGATGCT CGACCTCGTT GCCGGACGCG CGGGGCAGGG GGTGACCGAT CCCTATTATG GCTCGGACGA GGGCTTTGCC GCGACGTGGG AGGATGTGGC GGCGGTCGCT TCGGCGCTCG CCGCGCGCTG GTCGACGAGC GGATAG
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Protein sequence | MGKDGKVRPA ILFLCLGNIC RSPLGEGAAR AAFAAAGIDA HIDSAGTGNW HVGHPPDRRA QAEAQRRGID ISGLRARQLV RDDFYRFDLI LAADESNLRD ALAIRPDDAT AELCLMLDLV AGRAGQGVTD PYYGSDEGFA ATWEDVAAVA SALAARWSTS G
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