| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0814 |
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| Symbol | |
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| ID | 4080460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 819123 |
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| End bp | 819737 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638009174 |
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| Product | 2',5' RNA ligase |
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| Protein accession | YP_615866 |
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| Protein GI | 103486305 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0429947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00104301 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGACGC ACCGCCTGTT CGTCGCGCTG CGACCGCCGC CGCCCGTTCG CGCACTTTTG
CTGCGCGCGA TGCACGGCAT TTCGGGCGCG CGCTGGCAAA GCGACGAGCA GCTTCACCTG
ACGCTGCGCT TCATCGGCGA GGTCGACCAC CATCTGGCCG AAGACATTGC GGCGGTGCTG
GGCGCGCTCC ACGCACCGGC GGCGAGGGTG CGTATCGCCG GCGTCGACCT GTTCGAGCGG
CAGGGGCGAC CGCACATGGT CTGGGCGCGC ATCGCCCCCG AAGAGCCGCT CGCCGCGCTG
CACCGCAAGG TCGAACAATG TCTGGCGCGC GTCGGCATCG CGGCCGAAAC CCGCGCCTTC
GTGCCGCATG TCACGCTGGC GCGGCTCAAC CGGTCATCGG GGCCGGTCGC GCCCTTTCTC
GCGCTGAACG GAGATCTTGC GAGCGACCCC TTTCTGTTCG ACCATGTCAC GCTTTACGAG
AGCGAAATGG GGCACGGCGG CTCACGCTAT CACCCCGTCG CGCGCTATCC GCTCGTCGAC
CAGCGCGCGG CGAGCGCCGA AGCGACCGCC GCCACATCCT CCCACGTCGC GGCAAAGCCC
TCGTCCGAGC CATAA
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| Protein sequence | MSTHRLFVAL RPPPPVRALL LRAMHGISGA RWQSDEQLHL TLRFIGEVDH HLAEDIAAVL
GALHAPAARV RIAGVDLFER QGRPHMVWAR IAPEEPLAAL HRKVEQCLAR VGIAAETRAF
VPHVTLARLN RSSGPVAPFL ALNGDLASDP FLFDHVTLYE SEMGHGGSRY HPVARYPLVD
QRAASAEATA ATSSHVAAKP SSEP
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