Gene Sala_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0792 
Symbol 
ID4080436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp798357 
End bp798809 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content67% 
IMG OID638009152 
ProductRpiB/LacA/LacB family sugar-phosphate isomerase 
Protein accessionYP_615845 
Protein GI103486284 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0447104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0700549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG CCATCGCCGC CGACCACGCC GCCTATGAAC TGAAAGCCCT GCTCGCCGAC 
TGGCTGCGCG AAAAGGGACA CGAGGTCGAG GATCTGGGCA CCAACGGCCC CGACAGCGTC
GATTATCCCG ATTATGGCTA TCGGCTGGGC GGTGCGATCG CCGACGGCCG CGCCGACCGC
GGCGTTGCCC TGTGCGGATC GGGCATCGGC ATCTCGATCT CGGTCAACCG CAACCCCGCC
GCGCGCTGCG CTTTGGTGTC CGAGCCGCTG TCGGCGAAGC TGGCGCGCGA GCATAATGAC
GCGAACGTGA TCGCCATGGG TGCGCGCCTC ACGGGTATCG ACATGGCCAA GGCGTGCCTC
GACGCTTTCC TGACCACCGA TTTCGCCGGC GACCGCCACG CGCGCCGCGT CGACAAACTC
TCTAACCCGC CGCAACTGGA GACCAGCCGA TGA
 
Protein sequence
MRIAIAADHA AYELKALLAD WLREKGHEVE DLGTNGPDSV DYPDYGYRLG GAIADGRADR 
GVALCGSGIG ISISVNRNPA ARCALVSEPL SAKLAREHND ANVIAMGARL TGIDMAKACL
DAFLTTDFAG DRHARRVDKL SNPPQLETSR