Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0792 |
Symbol | |
ID | 4080436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 798357 |
End bp | 798809 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638009152 |
Product | RpiB/LacA/LacB family sugar-phosphate isomerase |
Protein accession | YP_615845 |
Protein GI | 103486284 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0447104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0700549 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCATCG CCATCGCCGC CGACCACGCC GCCTATGAAC TGAAAGCCCT GCTCGCCGAC TGGCTGCGCG AAAAGGGACA CGAGGTCGAG GATCTGGGCA CCAACGGCCC CGACAGCGTC GATTATCCCG ATTATGGCTA TCGGCTGGGC GGTGCGATCG CCGACGGCCG CGCCGACCGC GGCGTTGCCC TGTGCGGATC GGGCATCGGC ATCTCGATCT CGGTCAACCG CAACCCCGCC GCGCGCTGCG CTTTGGTGTC CGAGCCGCTG TCGGCGAAGC TGGCGCGCGA GCATAATGAC GCGAACGTGA TCGCCATGGG TGCGCGCCTC ACGGGTATCG ACATGGCCAA GGCGTGCCTC GACGCTTTCC TGACCACCGA TTTCGCCGGC GACCGCCACG CGCGCCGCGT CGACAAACTC TCTAACCCGC CGCAACTGGA GACCAGCCGA TGA
|
Protein sequence | MRIAIAADHA AYELKALLAD WLREKGHEVE DLGTNGPDSV DYPDYGYRLG GAIADGRADR GVALCGSGIG ISISVNRNPA ARCALVSEPL SAKLAREHND ANVIAMGARL TGIDMAKACL DAFLTTDFAG DRHARRVDKL SNPPQLETSR
|
| |