Gene Sala_0750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0750 
Symbol 
ID4081160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp757045 
End bp757917 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content62% 
IMG OID638009108 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_615803 
Protein GI103486242 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC GCGACCGGCT CGGGGGTTAT GCCTTCGTCC TGCCGTTCGT GGCGGCGTAC 
AGCTTCCTGC TGATCGTCCC CTTTATCATG GGCGCGTGGA TCAGTTTCCA CCGCGCCGAT
CTTTTCGGGG CGCGCCAATG GATCGGATTG GATAACTACG CCCGCCTCTT CGGCGACCCG
GTCTTCTACC AGGCGATGGG AACGACATTC CTGCTGGCCC TGATGATCGT GCCGGCGCTG
ACGATCATCA CCTTGATGCT TGCGCTGGCG CTGAACCGGG CAACGCGTGC GGCGGCAATA
TTTCGGGGGT TGTTCTTCTC CTCGTCGGTG CTTTCGGTCA CGATCGTCAC CCTGATCTGG
CGCTTTGTCC TGACCCCGGA CGCCGGGTTG ATCGCGAAGC TGCTAACCGC ATTGGGGATG
GAGCCGCTGC CATTTCTCAG TCACCCCGAT CTGGTCGTCC CTGCGATCGC GCTCACCACG
ATCTGGTGGG GCCTGGGGCT GCCAATGATG TTGTTTCTGG CAGGCTTGCA GCAGATTCCG
CAGGACATGT ACGAGGCGGC GGCGCTGGAT CGCGCCAGTC GATGGACCGT GTTTCGCCGG
ATCACGCTTC CCTCGCTTCG CCGCACCACG ATTTTGGTGG TCATGTTGCA GACCGCTGCC
CAGCTACAGA TATTCGGGCA GGCGCAGTTG CTTACATCGG GCGGACCAAG CGGCAGTTCG
CGGCCGATCG TTCTCTACAT CTATGAAATT GCGTTCGGCC GATGGGAACT TGGCTACGCC
GTCGCCGCCG CCGAAGTCCT GTTCGTGCTG GTTCTCGCGC TGACACTGGG ACAATATTGG
TTCGGCACGC GCGATGAAGG GGCGTCTCGA TGA
 
Protein sequence
MTARDRLGGY AFVLPFVAAY SFLLIVPFIM GAWISFHRAD LFGARQWIGL DNYARLFGDP 
VFYQAMGTTF LLALMIVPAL TIITLMLALA LNRATRAAAI FRGLFFSSSV LSVTIVTLIW
RFVLTPDAGL IAKLLTALGM EPLPFLSHPD LVVPAIALTT IWWGLGLPMM LFLAGLQQIP
QDMYEAAALD RASRWTVFRR ITLPSLRRTT ILVVMLQTAA QLQIFGQAQL LTSGGPSGSS
RPIVLYIYEI AFGRWELGYA VAAAEVLFVL VLALTLGQYW FGTRDEGASR