Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0750 |
Symbol | |
ID | 4081160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 757045 |
End bp | 757917 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638009108 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_615803 |
Protein GI | 103486242 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGC GCGACCGGCT CGGGGGTTAT GCCTTCGTCC TGCCGTTCGT GGCGGCGTAC AGCTTCCTGC TGATCGTCCC CTTTATCATG GGCGCGTGGA TCAGTTTCCA CCGCGCCGAT CTTTTCGGGG CGCGCCAATG GATCGGATTG GATAACTACG CCCGCCTCTT CGGCGACCCG GTCTTCTACC AGGCGATGGG AACGACATTC CTGCTGGCCC TGATGATCGT GCCGGCGCTG ACGATCATCA CCTTGATGCT TGCGCTGGCG CTGAACCGGG CAACGCGTGC GGCGGCAATA TTTCGGGGGT TGTTCTTCTC CTCGTCGGTG CTTTCGGTCA CGATCGTCAC CCTGATCTGG CGCTTTGTCC TGACCCCGGA CGCCGGGTTG ATCGCGAAGC TGCTAACCGC ATTGGGGATG GAGCCGCTGC CATTTCTCAG TCACCCCGAT CTGGTCGTCC CTGCGATCGC GCTCACCACG ATCTGGTGGG GCCTGGGGCT GCCAATGATG TTGTTTCTGG CAGGCTTGCA GCAGATTCCG CAGGACATGT ACGAGGCGGC GGCGCTGGAT CGCGCCAGTC GATGGACCGT GTTTCGCCGG ATCACGCTTC CCTCGCTTCG CCGCACCACG ATTTTGGTGG TCATGTTGCA GACCGCTGCC CAGCTACAGA TATTCGGGCA GGCGCAGTTG CTTACATCGG GCGGACCAAG CGGCAGTTCG CGGCCGATCG TTCTCTACAT CTATGAAATT GCGTTCGGCC GATGGGAACT TGGCTACGCC GTCGCCGCCG CCGAAGTCCT GTTCGTGCTG GTTCTCGCGC TGACACTGGG ACAATATTGG TTCGGCACGC GCGATGAAGG GGCGTCTCGA TGA
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Protein sequence | MTARDRLGGY AFVLPFVAAY SFLLIVPFIM GAWISFHRAD LFGARQWIGL DNYARLFGDP VFYQAMGTTF LLALMIVPAL TIITLMLALA LNRATRAAAI FRGLFFSSSV LSVTIVTLIW RFVLTPDAGL IAKLLTALGM EPLPFLSHPD LVVPAIALTT IWWGLGLPMM LFLAGLQQIP QDMYEAAALD RASRWTVFRR ITLPSLRRTT ILVVMLQTAA QLQIFGQAQL LTSGGPSGSS RPIVLYIYEI AFGRWELGYA VAAAEVLFVL VLALTLGQYW FGTRDEGASR
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