Gene Sala_0744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0744 
Symbol 
ID4081154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp751699 
End bp752343 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID638009102 
ProductKDPG and KHG aldolase 
Protein accessionYP_615797 
Protein GI103486236 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.848409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCAG CCGTCGAAGC ATTCCATCGT TACCGCGTTG AATGCCCCAT CATTGCCATT 
TTGCGCGGCA TTGCGCCGGA CGAGGTTGTT CGGGTCGGCG AGGCCCTCCT TTCCGCTGGA
ATCCGGATTA TCGAGATACC CTTGAATTCG CCCGATCCGT TCGAGAGCAT TCGACGCCTT
TCAAAATCAG TGGGTGGCCA AGGTCTGGTG GGTGCGGGAA CGGTGCTGGA CGTCGATCAG
GTCGCGCGTG TGGAGGAAGC AGGGGGGCGG CTCGTCGTGT CACCCAACAC CGATGCGGCC
GTGATCAAAA AGACTGTTGT TGCCGGACTG GTGTCCGTCC CCGGTTATTT CACGCCGTCG
GAAGCGTTTG CGGCCATTGC CGCTGGCGCG CACGGCATCA AATTATTTCC GGCCGAGGCT
GCCACGCCCG CGGTGGTGAA GGCGCAGCGT GCGGTATTGC CGAACGATGT GCCGCTGCTC
GTCGTCGGCG GCGTGACCGC GGACGACTTT GGCCGATGGC TGGCGGCAGG CGCTGACGGC
TTTGGCCTTG GCGGTGCTCT CTATCGCGCG GGCGACACAG TGACTCAGGT TCATCAACGC
GCGGCCCGGT TTGTGGCTAC GCTCAAACCG GGGGCGCGCC AGTGA
 
Protein sequence
MSPAVEAFHR YRVECPIIAI LRGIAPDEVV RVGEALLSAG IRIIEIPLNS PDPFESIRRL 
SKSVGGQGLV GAGTVLDVDQ VARVEEAGGR LVVSPNTDAA VIKKTVVAGL VSVPGYFTPS
EAFAAIAAGA HGIKLFPAEA ATPAVVKAQR AVLPNDVPLL VVGGVTADDF GRWLAAGADG
FGLGGALYRA GDTVTQVHQR AARFVATLKP GARQ