Gene Sala_0743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0743 
Symbol 
ID4081153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp750803 
End bp751702 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content62% 
IMG OID638009101 
Product2-dehydro-3-deoxygalactonokinase 
Protein accessionYP_615796 
Protein GI103486235 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3734] 2-keto-3-deoxy-galactonokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACTGGA ATGAAAAATA TATCGCGGTC GACTGGGGGA CGACCAACAG GCGCGCGTGG 
CTCGTCGACC CTAGCGGCAA TGTCTCTGCC CGGTTCGCGG ACAATTTGGG GTTAATGGCG
GTTCCACCTG GCGGCTTCGA GGCCGCCGCG GCCGATATCC GGCAACAACT CGGACCCTGG
CCGATGTTGC TCGCGGGGAT GGTGGGTTCG GATCAGGGCT GGCAGCAGGC GCCTTATGTC
GCCTGTCCGG CGAGCGCGAA GATGCTCGCC GACAATATCG TCTGGATCGA CGACAATCGC
AGCGGAATCG TGCCGGGTGT CTGCCAGACT TCCGGCCATC CGGACGTGAT GCGGGGCGAA
GAGGTGCAGG CAATCGGTGC TGTGAACGGC AGCCTTGTGT CGCCGGACGC TTACATCTGT
CATCCGGGAA CCCATGCGAA ATGGATCCGG TTGGAGCGTG GGCAAATAGC CGGATTCACG
ACGATGATGA CCGGCGAGTT ATTCAATCTG CTCCGGACGG GCAGCATATT GTCACCGCAA
ATGCAGTCGG AGGCCGTAGA CGGGGATCCG TTTCGAGCAG GCTTGGACGC AGCGTTCAGC
GGAGCATCGC TGTCGTCGGC CCTCTTCACC GTGCGCGCGC AATATCTGTT GTCGAATAGG
CCGGGCGACG GCGCCTCCTA TGCCAGCGGG CTGCTTATTG GCAGTGACGT AAGAGCCGGT
CTGGCTCAGG CCAGCCCCGG CGAAGAAATC GCCCTCATCG GGCGTGCCGA CCTGACCCGT
CTCTATGCTC TGGCCATCGA ATCGGCAGGA CATGGATACC GGCTCATCGA TGGCGATCGG
GCCTTCCTGG CCGGTATCGC GGCCATTGTC CCGTATCTTG AAAAGGAGCG AATTTCGTGA
 
Protein sequence
MDWNEKYIAV DWGTTNRRAW LVDPSGNVSA RFADNLGLMA VPPGGFEAAA ADIRQQLGPW 
PMLLAGMVGS DQGWQQAPYV ACPASAKMLA DNIVWIDDNR SGIVPGVCQT SGHPDVMRGE
EVQAIGAVNG SLVSPDAYIC HPGTHAKWIR LERGQIAGFT TMMTGELFNL LRTGSILSPQ
MQSEAVDGDP FRAGLDAAFS GASLSSALFT VRAQYLLSNR PGDGASYASG LLIGSDVRAG
LAQASPGEEI ALIGRADLTR LYALAIESAG HGYRLIDGDR AFLAGIAAIV PYLEKERIS