Gene Sala_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0728 
Symbol 
ID4081348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp733737 
End bp734429 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content67% 
IMG OID638009087 
ProductDSBA oxidoreductase 
Protein accessionYP_615782 
Protein GI103486221 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.782064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA TGCGGACGCC GCGCCTGAGC GTCGATATCG TGTCCGACGT CATGTGCCCC 
TGGTGCATCA TCGGCTGGTT GAAGTTCGAG CGGGTGATGG ATCATTTCGA CGGGCGGCTC
GATTTCCGCG TCCAGTGGCA TCCCTTCGAG CTCAACCCCG ATATGCCGCC CGAAGGCGAG
GATGCCGCCG CGCATGTCAT GCGCAAATAT GGCATCAGCG CCGAACAGAG CCGCGCCAAT
ACGGGCCGGC TCGCCGCCAT TGCCGGCGAA CTGGGTTTCG CCTTCAACCG CGGACCGGGT
TTCCGGATGC GCAACAGTTT CGACGCGCAC CGTCTGCTGA CCTGGGCGGG CGCCAGCGAG
GTGCCGGACC AGGCGGCGCC GACCGGTGTG CAGACCGCGC TCAAGCTGGC GTTGTTCAGG
GCGCATTTCA CCGACAATCG CGATGTCAGC GACCATGATG TGCTCGCCGA TGTCGCGGCG
TCGGTCGGAC TCGACCGCGC GCGCGCAGCC GCCATATTGG CCTCGGACGA GTTCGGCGCG
ATGGTGCGGA CCGAAGAGAG CTGGTGGGCC GACCGCAACA TCACCGGGGT GCCCGCTTTC
ATCCTCGGCG GGCAGATGCT GGTGCCGGGG GCGCAGGACC CCGAGGTGTT CATCCGCGTG
ATCGAGAAGA AGGTGCTCGC GCCCGCTGCG TGA
 
Protein sequence
MAEMRTPRLS VDIVSDVMCP WCIIGWLKFE RVMDHFDGRL DFRVQWHPFE LNPDMPPEGE 
DAAAHVMRKY GISAEQSRAN TGRLAAIAGE LGFAFNRGPG FRMRNSFDAH RLLTWAGASE
VPDQAAPTGV QTALKLALFR AHFTDNRDVS DHDVLADVAA SVGLDRARAA AILASDEFGA
MVRTEESWWA DRNITGVPAF ILGGQMLVPG AQDPEVFIRV IEKKVLAPAA