| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0687 |
|---|
| Symbol | |
|---|
| ID | 4081946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 695706 |
|---|
| End bp | 696470 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638009046 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_615741 |
|---|
| Protein GI | 103486180 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCCGAAC CCTCCGCCAC TCATTATCTC GACCGCACAG GCCGCCCACG GCTCGCCTAT
CGTTTCACGC CCGGCGCGGG GCCGACGATC GTCTTCCTGC CCGGCTATAT GTCCGACATG
GCGGGGGGCA AGGCGACCGC GCTGTTCGAT TGGGCCGCCG CCGAAGCGCG CGCGTGCCTG
TTGCTCGACT ATGCCGGGTG CGGGCTGTCG GACGGGCTGT TCGCCGAGCA GACCTTGCTC
GACTGGCGCG GCGATGTGCT CGACCTGATC GATGCGAAGG TCGATGGCCC CGTCATCCTC
GTCGGCTCGT CGATGGGCGG CTGGCTGATG CTGCTCACCG CGCTCGCGAT CGTCCGGCGC
GACGGGCCGG GCCGCGTCGC GGGGCTGGTC GGCATCGCGG CGGCGCCCGA CTTCACCGAC
TGGGGCTTCA CGCCCGAGGA AAAGGCGATC ATCCTTGCCG AAGGTGCGCT GGTCGAGGAG
ACGCCCTATG GCGACCAGCC TTATGTGACG ACGCGCGGCT TTTTCCGGTC GGGCGAGGCG
AACCGGCTGC TCGACGCCGA AATCCCCCTC ACCTGCCCTG TCCGCCTGCT CCACGGGCAG
GAGGATGGCG ACGTTCCGCC CGACATCAGC CTGCGCCTGG CGGCGGCGCT CGCGAGCGAC
GATGTGCAGG TCACGCTCGT CAAGGGCGGC GATCACCGCC TGTCGCGCGA CACCGACATC
GCGCTGCTGA TCGACACGGT CGCGCGCTTG GCGGCCGGAA ACTAA
|
|---|
| Protein sequence | MSEPSATHYL DRTGRPRLAY RFTPGAGPTI VFLPGYMSDM AGGKATALFD WAAAEARACL
LLDYAGCGLS DGLFAEQTLL DWRGDVLDLI DAKVDGPVIL VGSSMGGWLM LLTALAIVRR
DGPGRVAGLV GIAAAPDFTD WGFTPEEKAI ILAEGALVEE TPYGDQPYVT TRGFFRSGEA
NRLLDAEIPL TCPVRLLHGQ EDGDVPPDIS LRLAAALASD DVQVTLVKGG DHRLSRDTDI
ALLIDTVARL AAGN
|
|---|
| |