Gene Sala_0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0684 
Symbol 
ID4081943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp693889 
End bp694629 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content68% 
IMG OID638009043 
Producthydroxyacylglutathione hydrolase 
Protein accessionYP_615738 
Protein GI103486177 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID[TIGR03413] hydroxyacylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCAC TCGAAATCGT CCGGATCCCG GTCCTCAGCG ACAATTATGT CTGGCTGGTC 
CACGAGCCCG CCAGCGGCGC GACGATGGTG GTCGACCCGG CGGTCGCCGA TCCGGTGCTC
GACGCGGCGA AGGCGCGCGG CTGGGCGATC ACCGACATCT GGAACACCCA CTGGCACCCT
GACCATACGG GCGGCAATGC CGCGATCAAG GAAGCGGCCA AGGCATGGGG CGGCTGCACG
ATCACCGGCC CCGCGGCCGA ACATGAACGC ATCCCGACAC TCGACGTGCT GGTAAAGGGC
GGCGACACGG TGCGGCTGGG CGACCATGTC GCGGATGTCT GGGACGTCCC CGCGCACACC
GCGGGCCATA TCGCCTATCA TTTTGCGGAT GACGCCGCGA TCTTCGTCGG CGACACGATG
TTCGCCATGG GGTGCGGCCG CCTGTTCGAG GGGACGGCCG AGCAGATGTT CGCCAATATG
CAGAAGCTCA GGGCGCTCGA CGATGCAACG CGCGTTTATT GTGCGCACGA ATATACGCTG
TCCAACGCGC GTTTCGCGAT CACCGTCGAT CCGGCCAATG AGGCGCTGGC GGCGCGGCTT
GCCGCGGTCG AGGCTGCCCG CGCGGCGGGC GAGGCGACGG TGCCGACGAG CATCGGCGCC
GAGCGCGCGA CAAACCCCTT TTTCCGCGCG CCCGACGCCG CGGAACTCGC GCGCATCCGC
GCGCTCAAGG ATGCGGCGTG A
 
Protein sequence
MAALEIVRIP VLSDNYVWLV HEPASGATMV VDPAVADPVL DAAKARGWAI TDIWNTHWHP 
DHTGGNAAIK EAAKAWGGCT ITGPAAEHER IPTLDVLVKG GDTVRLGDHV ADVWDVPAHT
AGHIAYHFAD DAAIFVGDTM FAMGCGRLFE GTAEQMFANM QKLRALDDAT RVYCAHEYTL
SNARFAITVD PANEALAARL AAVEAARAAG EATVPTSIGA ERATNPFFRA PDAAELARIR
ALKDAA