Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0682 |
Symbol | |
ID | 4081941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 691469 |
End bp | 693274 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638009041 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_615736 |
Protein GI | 103486175 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.249968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGG AAAACCCCCA TCTCGACCAT TTCCCCAGCC TGGTCGCGAT GTTCTTCGAC CGCGCGGCGC GCGGCGGCGA GGATCCCTTT CTGTGGCACA AGGCCGACCG CGCCTGGCAG GCGCTGAGCT GGCGCGAGGT CGCCGAACAG GTCGCGGCGC TCGCGCACAA TCTGCGCAAG CTGGGGCTGA AAGAGGGCGA CCGGGTGGTG CTGGTGAGCG AGAACCGTCC CGAATGGTGC ATCGCCGACC TTGGCATCAT GGCCGCGGGG TGCATCACAG TCCCGACCTA TACGACCAAC ACCGAACGCG ATCATCAGCA TATCCTCGAC AACAGCGGCG CGCGCGCGGT GATCGTGTCG ACCGCAAAGC TCGCGCGCGT GCTGATGCCC GCGGTGATGC GCTCCGACGC GCATATTGTC ATTTCCATGG AAAGTCTGCG CGTCGGGCAA CAGGGCGACG TGTCGGTCCA CGACTGGGCG CCGCTGGTTG CAGGCGGCGC CGCATGGGTC GAGGAGGCAA AGGCGCGCGG CCTCGGCGTC AAGCGCGAGG ACACCGCCTG CCTCATCTAT ACCAGCGGCA CGGGCGGGGC GCCGCGCGGC GTGATGCAGC ATCATGGCGC GATCCTGCAC AACGCCGCGG GCGCCGCCGA AATCCTGGTC AATGATTTCG GGATCGGCGA CGAGGAAGTG TTCCTCTCCT TCCTGCCGCT CAGTCACGCC TATGAACATT CGGGCGGGCA GTTCCTGCCG ATCATGGTCG GCGCGCAAAT CTATTACAGC GAGGGGCTCG AAAAGCTCGT CTCGAACATC GAGGAGACGC GCCCGACGAT CATGGTCGTC GTTCCGCGGC TGTTCGAGGT GATCCGCGCG CGAATGATCA AGGCGGTTGA AAAGCAGGGC AAGCTCGCGA ACTGGATGCT GGCCCAGGCG CTGCGCGTCG GCGAAAAGGA TTATGCGCGG CGCATGGGCG TGCTCGACCG GCCGGTCGAT ATATTGCTCA ACCGGCTGTT CCGTCCCAAG ATCCGGAAAA GGTTCGGCGG CCGGATGAAG GCCCTGGTAT CGGGCGGCGC GCCGCTCAAC CCGGAGATCG GCGTCTTTTT CCATTCGATC GGGCTGACGC TGCTGCAAGG CTATGGTCAG ACCGAGGCGG GACCGGTCAT CAGTTGCAAC CGGCCGAAAA CGGGCCTCAA GATGGATACC GTCGGTCCCC CGCTGATGAA CACCGAGGTG CGCATCGCCG ACGACGGCGA AATCTGTGTG CGCGGCGAAC TGGTGATGAA GGGTTATTGG CGCAATCCCG CCGAAACCGA GCGCGTGCTG ATCGACGATT GGCTCCACAC CGGCGACATC GGCCATATCG ACGAAGCGGG GCGCATCGTC ATCACCGACC GCAAGAAGGA CCTGATCGTC AACGACAAGG GCGACAATGT CTCGCCGCAG CGCGTCGAGG GGATGCTGAC GCTGCAACCC GAGATATTGC AGGCGATGGT CTATGGCGAC AAGCGCCCGC ACCTCGTCGG CATCCTGGTG CCCGATCCCG AATGGGCGGC CGAATGGGCG GAGGCCGAAG GGCTGCCGAA AGAGATGCCG CTGCTGCGCG AACATGAAAA GTTCCGTGCG GCGATCCGCG CCGCGGTCGA CCGCGTCAAC GGGCAGCTTT CGGTGATCGA AAAGGTGCGC AAGTTCGACT TCGCCGACGA AGCCTTCACC ATCGAGAATG AACAGATGAC GCCGTCGATG AAAATCCGCC GCCACGTGCT GCGGGAGATT TATGCGGACA AGATTGCGGC CTTGTACAAG GCATAA
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Protein sequence | MKLENPHLDH FPSLVAMFFD RAARGGEDPF LWHKADRAWQ ALSWREVAEQ VAALAHNLRK LGLKEGDRVV LVSENRPEWC IADLGIMAAG CITVPTYTTN TERDHQHILD NSGARAVIVS TAKLARVLMP AVMRSDAHIV ISMESLRVGQ QGDVSVHDWA PLVAGGAAWV EEAKARGLGV KREDTACLIY TSGTGGAPRG VMQHHGAILH NAAGAAEILV NDFGIGDEEV FLSFLPLSHA YEHSGGQFLP IMVGAQIYYS EGLEKLVSNI EETRPTIMVV VPRLFEVIRA RMIKAVEKQG KLANWMLAQA LRVGEKDYAR RMGVLDRPVD ILLNRLFRPK IRKRFGGRMK ALVSGGAPLN PEIGVFFHSI GLTLLQGYGQ TEAGPVISCN RPKTGLKMDT VGPPLMNTEV RIADDGEICV RGELVMKGYW RNPAETERVL IDDWLHTGDI GHIDEAGRIV ITDRKKDLIV NDKGDNVSPQ RVEGMLTLQP EILQAMVYGD KRPHLVGILV PDPEWAAEWA EAEGLPKEMP LLREHEKFRA AIRAAVDRVN GQLSVIEKVR KFDFADEAFT IENEQMTPSM KIRRHVLREI YADKIAALYK A
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