| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0660 |
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| Symbol | |
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| ID | 4082750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 670443 |
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| End bp | 672233 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009019 |
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| Product | TrkA-C |
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| Protein accession | YP_615714 |
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| Protein GI | 103486153 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.178336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.122015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGACG TCGCCCGCAC CTTTATCACC AATCATCAGG CGATCATCGG CCTCGTCGTC
CTGGGCCTGA TGTTCGTCGG TTTCGTTCTG GAGCGCTTTC CCGCAACCGT TGTCGCCATC
CTCGGAACCT GCACCTTCCT CTTCCTCGGC ATCCTGTCGG GGCGCGACCT GTTCTCGGTC
TTTTCCAATC CGGCGCCGGT GACGATCGGC GCGATGTTCA TCCTGTCGGG GGCGCTGTTG
CGGACGGGGA CGCTGGATGC GATCGCCAGC CGGATCATCG CGCGCGCGCA GCGACATCCC
AGGCTGGCGC TCGCGGAAAT GTTCCTTGGC GTCTACGTCG CCTCGGCCCT CCTCAACAAC
ACGCCGGTCG TCGTGGTGAT GATCCCGATC ATGCTCCGCC TTGCGGCCGC CCTCAATCTG
AGCGCGAAGC GGCTGCTGAT CCCGCTGTCC TATGTGGCGA TCCTCGGCGG CACGACCACG
CTGGTCGGCA CCTCGACCAA CCTGCTCGTC GCCGCCGTGG CCGAGGAGAA TGGGCTCGAC
GGCTTTGGTA TTTTCACCAT CACGCCTGTC GGACTGGTCG CGGGCGTGAT CGGCGCCTTT
GGTCTGCTCG CGATCGCGCG GCGTTTCCTG CCCGATGACG CGCCGAACCA GATCGCGCTC
AGCCAGGATC ATCGCTCCTT CCTGTCCGAA GTGCGGATAT TGAAGGATGG TAATCTGGTG
GGCCGGCGCG TTGGCGATGT GCCCTTTGCC AGGCGCGCCA ACGTCAGGCT GGTCGGGCTG
AAGCGCGGCG GCACGCTCCG CCGCACTGCG CTTGCCGACG AAATACTGCA GGCCGACGAC
CGCCTGGTGC TGCGGCTCGA GCTTGCCGAG TTGCTGTCGC TGCGCGCGAA CAAGAATGTC
GCGATCGGGC TGACCGCCGG GCATGACGAT GTCGAGCAGG ATGAGGAAGA GATTGTCGAG
GCGATGATCG CGCCCAGCCA TCCCGCGATT GGCCGTCGCC TGATCGAAAT CCCTTTCCTC
TCGGCGCTGC GCGTCCGCAT CCTCGGCATC GCGCGCTTTC GCAAGACGCC CGGTCCGGAC
CTGCCCAATG CGCGCATCCA GGCGATCGAT CGCGTACTTG TCACCGGGCC GACGGACCAG
ATCGAGCAGA TGTATGCCAA TCCACATCTT TATGGCGTCG GCTCGACGAC CGAGCGCGAG
TTCCGGCGCG GCAAGGCGCC GATAGCGATC GGCGCCCTGC TCGGCGTCAT CCTGCTCGCG
TCGTTCAACG TCATGGACAT CGGTGTCGCG GCAATCATCG GCGTCGGGCT GATCCTCGTC
ACCCGCTGCA TCGACGCCGA CGAAGCGTGG GATTCGATCG ACGGCAATGT GCTCGTGCTG
ATTTTCGCGA TGCTTGCCGT CGGGCTGGCG CTCGAAAATT CGGGCAGCGT TGCGCTCGTG
GTGGGCAAAT TGACGCCGGT GCTGGCCGAT GTGCCGCCGT GGGGGCTCGT GCTCGCGACC
TACGCCATTT CGGTGCTGCT GACCGAGGTG GTGACCAACA ATGCCGTTGC GATCCTCGTC
ACCCCGCTCA CCATTGCCGT TGCGCGCGAT CTCGGCGTCG ATCCCTATCC GCTGGTCGTC
GCGGTGATGT TCGCCGCCTC TGCCAGCTTT GCGACGCCGA TCGGCTATCA GACGAATACG
CTGGTCTATG CGGCGGGTAA TTATCGGTTC GTCGATTTCG TTCGCGCCGG CGTTCCGATG
ACCTTGTTCG TCGGTGCGGC CACGGTGGCT GCGATCAGCC TGTTGATGTG A
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| Protein sequence | MIDVARTFIT NHQAIIGLVV LGLMFVGFVL ERFPATVVAI LGTCTFLFLG ILSGRDLFSV
FSNPAPVTIG AMFILSGALL RTGTLDAIAS RIIARAQRHP RLALAEMFLG VYVASALLNN
TPVVVVMIPI MLRLAAALNL SAKRLLIPLS YVAILGGTTT LVGTSTNLLV AAVAEENGLD
GFGIFTITPV GLVAGVIGAF GLLAIARRFL PDDAPNQIAL SQDHRSFLSE VRILKDGNLV
GRRVGDVPFA RRANVRLVGL KRGGTLRRTA LADEILQADD RLVLRLELAE LLSLRANKNV
AIGLTAGHDD VEQDEEEIVE AMIAPSHPAI GRRLIEIPFL SALRVRILGI ARFRKTPGPD
LPNARIQAID RVLVTGPTDQ IEQMYANPHL YGVGSTTERE FRRGKAPIAI GALLGVILLA
SFNVMDIGVA AIIGVGLILV TRCIDADEAW DSIDGNVLVL IFAMLAVGLA LENSGSVALV
VGKLTPVLAD VPPWGLVLAT YAISVLLTEV VTNNAVAILV TPLTIAVARD LGVDPYPLVV
AVMFAASASF ATPIGYQTNT LVYAAGNYRF VDFVRAGVPM TLFVGAATVA AISLLM
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