Gene Sala_0619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0619 
Symbol 
ID4082555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp630889 
End bp631764 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content62% 
IMG OID638008978 
Producthypothetical protein 
Protein accessionYP_615673 
Protein GI103486112 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.437288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.868848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAG ATAAACAACC CCATCGTTCG CGTTTCCACA AGGCGAAGGA CGACGCGCAA 
TTCGCCCAGC AGGCGACCAC CACCCCGCAG ACCGCGCACC CCGCATATCG GCTTGCATTC
CAGGACAATG ATTTCCTGCT GCGCGAAGAT TTGCGCCCTG TCCGTTTCCA GCTCGAATTG
CTCAAGCCCG AACTCCTGCT CGACGAGGCG GGAATCGAAT CGACGCTCGT CGTCTATGGT
TCGGCGCGCA TTCCCGAACC CGGAGAGGCC GACGCACTCG AGGCCGCGGC GACCGACGAT
GCGACGCGCA ACATCGCCCG CCGCCTGAAG GCCAAGGCCA AATATTATGA CGAAGCGCGC
GCGCTGGCGC GGCTCGCGAG CCAATATCCG TGCGACGACA AGGGTTGCCG CCACTTCGTT
GTCTGTTCGG GCGGCGGGCC GTCGATCATG GAGGCAGCGA ACCGCGGCGC CGCCGACGAG
GGCCGCGAAT CGATCGGGCT CAACATCGTG CTTCCCCATG AACAGGCCCC CAACCGCTTC
GTCACCCCGT CGCTGAGTTT CCAGTTCCAC TATTTCGCGC TGCGCAAGAT GCACTTCCTG
CTTCGCGCGC GCGCCGTGTG CGTTTTTCCC GGCGGCTTCG GGACGTTCGA CGAGATGTTC
GAGCTGCTCA CGCTCATCCA GACGGGCAAG ATCAAGCCGA TCCCGATCGT GCTGTTCGGC
AAGGAGTTCT GGCAGCGCGT CGTCAATTTC GAAGCGCTGG TCGAGGAAGG CGTCGTCAGC
GCGCGTGACC TCGGCCTCTT CCAGTTCGTC GAGACCGCCG ACGAAGCGTG GAAGATCATT
CAGGATTTCT ACGCGAATAT CGAAGAGCAG CATTGA
 
Protein sequence
MAEDKQPHRS RFHKAKDDAQ FAQQATTTPQ TAHPAYRLAF QDNDFLLRED LRPVRFQLEL 
LKPELLLDEA GIESTLVVYG SARIPEPGEA DALEAAATDD ATRNIARRLK AKAKYYDEAR
ALARLASQYP CDDKGCRHFV VCSGGGPSIM EAANRGAADE GRESIGLNIV LPHEQAPNRF
VTPSLSFQFH YFALRKMHFL LRARAVCVFP GGFGTFDEMF ELLTLIQTGK IKPIPIVLFG
KEFWQRVVNF EALVEEGVVS ARDLGLFQFV ETADEAWKII QDFYANIEEQ H