| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0610 |
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| Symbol | nusA |
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| ID | 4082546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 619846 |
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| End bp | 621492 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638008969 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_615664 |
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| Protein GI | 103486103 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.131908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACTG CCATTTCCGC CAACAAGGCC GAACTGCTCG CGATCGCCAA CAGCGTCGCC
AGCGAGAAGA TGATCGACAA GGCTATCGTC ATCGAGGCGA TCGAGGAAGC GATCCAGCGT
GCCGCGCGCG CCCGCTATGG CGCCGAGAAC GACATTCGCG CCAAGCTCGA CCCGCAGACC
GGCGACCTGC GCCTGTGGCG CGTCGTCGAA GTGGTCGAGA CGGTCGAGGA TTATTTCAAG
CAGGTCGACC TCGCCGCCGG GCAAAAGTTG CAGAAGGACG CCAGGATCGG CGACTTCATC
GTCGATCCGC TGCCCGCCGT CGACCTTGGC CGCATCGACG CGCAGTCGGC GAAGCAGGTG
ATCTTCCAGA AGGTTCGCGA AGCCGACCGG GAACGCCAGT ATCAGGAGTT CAAGGATCGC
GCCGGAGAGA TTATCACCGG CGTCGTGAAA TCGGTCGAGT TCGGCCATAT CGTCGTCAAT
CTGGGCCGCG CCGAGGGCGT GATCCGCCGC GACCAGCAAA TCCCGCGCGA ATTGATGCGC
GTCGGCGACC GCGTCCGCGC GCTGATCCTG TCGGTGCGCA GCGAAACGCG CGGGCCGCAG
ATTTTCCTCT CGCGCGCGCA TCCCGACTTC ATGAAAAAGC TGTTCGCGCA GGAGGTGCCC
GAAATCTATG ATGGCATCAT CGAGATCAAG GCTGCCGCGC GCGATCCGGG CAGCCGGGCG
AAGATCGGCG TGATCAGCTA TGACAGCAGC ATCGACCCCG TCGGCGCCTG TGTGGGCATG
AAGGGCAGCC GCGTTCAGGC GGTCGTTCAG GAATTGCAGG GCGAAAAGAT CGACATCATT
CCCTGGTCGG AGGACACGGC GACCTTCGTG GTCAATGCGC TTCAGCCGGC CACGGTGCAG
CGCGTCGTCA TCGACGAGGA TGATGGTCGC ATCGAGGTCG TCGTCCCCGA CGATCAGCTC
AGCCTCGCCA TCGGTCGCCG CGGCCAGAAC GTCCGTCTTG CCAGCCAGCT GACCGGCAAG
CAGATCGATA TCATGACCGA GGCGGATGCG AGCGAGAAGC GGCAGCGCGA ATTCGTCGAA
CGCTCGACGA TGTTCCAGGA GGAACTCGAC GTCGACGAAA CACTGGCACA GCTCCTCGTC
GCCGAAGGCT TCAGCGAGCT CGAGGAAGTC GCCTATGTGC CGCTCGACGA ACTGGCAAGC
ATCGAGGGTT TCGACGAGGA ACTGGCGCAG GAACTGCAGA GTCGCGCTGC CGAGGGGCTG
GAGCGTCGCG AGGAGGCGGC GCGCGCCGAG CGTCGCGAAC TGGGCGTCGA GGATGCACTC
GCCGACATCC CGCACCTGAC CGAAGCGATG CTTGTCACGC TCGGCAAGGC CGGAATCAGG
ACGCTCGACG ATCTTGCAGA CCTTGCGACC GACGAACTGA TCGCCAAGAA ACGAACCGAC
AACCGCCGCG GCCCGGCGCG CAGCGAGCGC GCCGAGGACA AGGGCGGCGT GCTCGGCGAA
TATGGCCTGA GCGAAGAGCA GGGCAACGAG ATCATCATGG CGGCGCGTGC GCACTGGTTC
GACGATGAGG AGTCGAGCGA GCCGGCAACC GCGCCCGCGG CGGAGCCGCA AAACGGGGAG
GCCGCCGATG CGGACCCCGC GCAATGA
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| Protein sequence | MATAISANKA ELLAIANSVA SEKMIDKAIV IEAIEEAIQR AARARYGAEN DIRAKLDPQT
GDLRLWRVVE VVETVEDYFK QVDLAAGQKL QKDARIGDFI VDPLPAVDLG RIDAQSAKQV
IFQKVREADR ERQYQEFKDR AGEIITGVVK SVEFGHIVVN LGRAEGVIRR DQQIPRELMR
VGDRVRALIL SVRSETRGPQ IFLSRAHPDF MKKLFAQEVP EIYDGIIEIK AAARDPGSRA
KIGVISYDSS IDPVGACVGM KGSRVQAVVQ ELQGEKIDII PWSEDTATFV VNALQPATVQ
RVVIDEDDGR IEVVVPDDQL SLAIGRRGQN VRLASQLTGK QIDIMTEADA SEKRQREFVE
RSTMFQEELD VDETLAQLLV AEGFSELEEV AYVPLDELAS IEGFDEELAQ ELQSRAAEGL
ERREEAARAE RRELGVEDAL ADIPHLTEAM LVTLGKAGIR TLDDLADLAT DELIAKKRTD
NRRGPARSER AEDKGGVLGE YGLSEEQGNE IIMAARAHWF DDEESSEPAT APAAEPQNGE
AADADPAQ
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