| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0567 |
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| Symbol | rpsM |
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| ID | 4081998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 580209 |
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| End bp | 580577 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638008925 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_615621 |
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| Protein GI | 103486060 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.625639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGTA TCGCGGGCGT CAACCTGCCC ACCAACAAAC GCGTGATCAT CGCGCTCACC
TATATCCACG GCATCGGCCG CAAGACCGCC GTTGACATCG CCGACAAGCT GGGCATCGAC
CACGGTCGCC GCGTGCAGGA CCTGTCGGAC GCCGAAGTCC TGCAGATCCG CGAAACGATC
GACGCCGACC ACACGGTCGA GGGCGACCTT CGCCGCAACA CGGCGATGAA CATCAAGCGC
CTGATGGACC TCGCCTGCTA TCGCGGCCTG CGCCATCGCA AGGGCCTCCC CGTTCGCGGC
CAGCGCACGC ACACCAATGC GCGCACCCGC AAGGGCAAGG CCAAGCCGAT CGCCGGCAAG
AAGAAGTAA
|
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| Protein sequence | MARIAGVNLP TNKRVIIALT YIHGIGRKTA VDIADKLGID HGRRVQDLSD AEVLQIRETI
DADHTVEGDL RRNTAMNIKR LMDLACYRGL RHRKGLPVRG QRTHTNARTR KGKAKPIAGK
KK
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