| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0565 |
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| Symbol | |
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| ID | 4081455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 578579 |
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| End bp | 579637 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638008923 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_615619 |
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| Protein GI | 103486058 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.548762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.672721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTCA ACATCCGGAA CTGGCAGGAA TTGAAGAAGC CCAGCAACCT GGAAATCAAG
ACCGGCGGCG ACGGCAAGCG CAAGGCGACC TTCGTTGCCG AACCGCTCGA GCGCGGTTTC
GGCCTGACGC TGGGTAACGC GCTGCGCCGC GTGCTGCTCT CGTCGCTCCA GGGCGCGGCG
ATCACCTCGA TCAAGATCGA AAATGTGCTG CACGAGTTTT CGAGCCTTGC CGGTGTGCGC
GAAGACGTCA CCGACATCGT CCTGAACGTC AAGCAGATCG CGCTCAAGAT GGAGGGCGAA
GGGCCGAAGC GGCTCCAGCT TTCGGCGACG GGCCCGGCGA CGGTCAAGGC GGGCGACATC
ATGGTGTCGG GCGACATCAA GGTGATGAAC CCGAACCATG TCATCTGCCA TCTCGACGAA
GGCGCGACGC TCAACATGGA GCTCGTCGCC GACACCGGCA AAGGCTATGT CCCCGCGACC
GCCAACCGCC CGGCCGATGC GCCGATCGGC CTGATCCCGG TCGACTCGCT CTATTCGCCG
GTGCGCCAGG TCGCCTACAA GGTCGACAAT GCCCGCATCG GGCAGGAACT GGACTATGAC
AAGCTGAACC TGACCGTCGA AACCGACGGC ACGGTGACGC CCGAAGATGC TGTCGCTTAC
GCCGCACGCA TCCTGCAGGA TCAGCTCCAG GTCTTCGTCC ACTTCGAAGA AGCGATGAGC
GACAGCGGCC TGATCGGCAT GGCGGCCCCC TCGGCCGCCA GCGACGAGTC CGACGTCAAC
CAGCTCAACC GCTTCCTGCT CAAGAAGGTC GACGAGCTTG AACTGTCGGT CCGCTCGGCC
AACTGCCTGA AGAACGACAA CATCATCTAT ATCGGTGACC TCGTTCAAAA GACCGAAGCC
GAAATGCTCC GCACGCCGAA CTTCGGCCGC AAGTCCTTGA ACGAAATCAA GGAAGTGCTG
TCGTCGATGG GCCTGCGTCT GGGCATGGAC ATCCCCGGCT GGCCACCCGA GAATATCGAG
GAAATGGCCA AGAAGCTGGA GCAGGAGCTG CTGGGTTAA
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| Protein sequence | MTVNIRNWQE LKKPSNLEIK TGGDGKRKAT FVAEPLERGF GLTLGNALRR VLLSSLQGAA
ITSIKIENVL HEFSSLAGVR EDVTDIVLNV KQIALKMEGE GPKRLQLSAT GPATVKAGDI
MVSGDIKVMN PNHVICHLDE GATLNMELVA DTGKGYVPAT ANRPADAPIG LIPVDSLYSP
VRQVAYKVDN ARIGQELDYD KLNLTVETDG TVTPEDAVAY AARILQDQLQ VFVHFEEAMS
DSGLIGMAAP SAASDESDVN QLNRFLLKKV DELELSVRSA NCLKNDNIIY IGDLVQKTEA
EMLRTPNFGR KSLNEIKEVL SSMGLRLGMD IPGWPPENIE EMAKKLEQEL LG
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