| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0564 |
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| Symbol | rplQ |
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| ID | 4081454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 577905 |
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| End bp | 578324 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638008922 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_615618 |
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| Protein GI | 103486057 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.684509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.93978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTCATA AATCGGGTGG CCGGAAGCTG CAGCGCACCA GCGCGCACCG CACGGCGATG
TTCCGCAACA TGTCGGCCTC GCTCATCAAG CATGAGCAGA TCACGACGAC CGTCGCCAAG
GCGAAGGAAC TGCGTCCCTA TGTCGAAAAA CTCGTCACGC TGGCGAAGCG CGGGGGCCTC
GCCAACCGCC GCCTCGCGAT GAGCCGCCTG ATGGACGAAG CGCAGCTTGC CAAGCTTTTC
GACGTGCTTG CGGCGCGCTA CAAGGACCGT AACGGCGGCT ATACACGCAT CATCAAGGCG
GGCATCCGCG CGTCAGACGC CGCGCCGATC GCGATCATCG AATTCGTCGA CCGCGACATG
GGCGCCAAGG GTCAGGATTC GGGCCCGGTG ACGACCGACG AGGAACTGGA AGACGCGTAA
|
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| Protein sequence | MRHKSGGRKL QRTSAHRTAM FRNMSASLIK HEQITTTVAK AKELRPYVEK LVTLAKRGGL
ANRRLAMSRL MDEAQLAKLF DVLAARYKDR NGGYTRIIKA GIRASDAAPI AIIEFVDRDM
GAKGQDSGPV TTDEELEDA
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