Gene Sala_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0548 
Symbol 
ID4081438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp562791 
End bp563105 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content57% 
IMG OID638008906 
Producthypothetical protein 
Protein accessionYP_615602 
Protein GI103486041 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.249593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.197287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCCAT CTTTCGATGC CAGATTGGGC GGGCATAAAT TTCGCCGACA GGCAATCCTT 
GGCCCCTGTA TCGCCGATTT CTGTTGCCCT CAGAAAGGGC TGGCGGTGGA GGTGGATGGC
GATACGCATA TTCTTGAGAC CGATGCTACA AGAGATGAAG CGCTGCGAAA CCAAGGTATC
GAGGTCGTTG GGATCAGGAA CGAGGATGTG CTGACGAATA TGGATGGCGT GCTGCGATAT
TTGTTGATCG AACTCGACCG CCGTGCGGAT CGATGGCCCC ACCCCAACCG CTCCCCTGAA
GGGGAGGGGC TTTAA
 
Protein sequence
MAPSFDARLG GHKFRRQAIL GPCIADFCCP QKGLAVEVDG DTHILETDAT RDEALRNQGI 
EVVGIRNEDV LTNMDGVLRY LLIELDRRAD RWPHPNRSPE GEGL