| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0542 |
|---|
| Symbol | rpsO |
|---|
| ID | 4081432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 555631 |
|---|
| End bp | 555900 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638008900 |
|---|
| Product | 30S ribosomal protein S15 |
|---|
| Protein accession | YP_615596 |
|---|
| Protein GI | 103486035 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0184] Ribosomal protein S15P/S13E |
|---|
| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.243245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.231043 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATTA CCGCCGAGCG CAAAGCCGAA GTCATCAAGG ACAATGCCCG CGACAAGGGC
GATACCGGTT CGCCGGAGGT TCAGGTGGCG ATCCTCACCG ACCGCATCAA CACGCTGACC
GAACATTTCA AGACGCACCG CAAGGACAAT CACAGCCGTC GCGGCCTGTT GATGATGGTC
AACAAGCGCC GCAGCCTCCT CGACTATCTT CGCAAGAAGG ACGAGGGCCG CTATCAGGCG
CTGATCGCGA AGCTGGGCCT TCGCAAGTAA
|
|---|
| Protein sequence | MSITAERKAE VIKDNARDKG DTGSPEVQVA ILTDRINTLT EHFKTHRKDN HSRRGLLMMV
NKRRSLLDYL RKKDEGRYQA LIAKLGLRK
|
|---|
| |