| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0533 |
|---|
| Symbol | |
|---|
| ID | 4081423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 548107 |
|---|
| End bp | 549528 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638008891 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_615587 |
|---|
| Protein GI | 103486026 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02946] acyltransferase, WS/DGAT/MGAT |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.741698 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTTGA TGCCGGTGAC CGATGCGATG TTCCTGTGGG GGGAAAGTCG CGAGATGCCG
ATGCACATCG GCGGCATCAA CCTCTACACG CTGCCCGACG GGGTCGACGA GACCGAGTGG
CTGAACGAAC AGCTCACGCT GCTCCGCCAG TCGGAGGGGT TGCGGCGCCC GTTCAGCGAG
GTGCTCAAGC TCACCCCCTT CGGTCAATAT GGCCCGATCC GCCTTGTGCC CGACCGCGAC
ATCGACATGC ACTATCATGT CCGCGCCGCC GCGCTGCCCA AGCCGGGGCG CTACCGCGAG
ATGTTCGAAC TCGCCTCGCG GCTCCATTCG GGCCTTCTCG ACCGCACCCG CCCCTTGTGG
GAAATCACGC TCATCTCCGG GCTGCCCAAC CGGCAGATCG CGACATTCAA GAAGGTCCAT
CACGCGCTTA TGGATGGCGC AGCGAGCATC CATTTCTATA ATTCGATGCT CTCGCCCGAT
CCCGACGAAC GGCGCACCGC CTCGCCGCTG TCGGTCGAGG CCTATGAGGC GTACAAGCGC
AGCTTCCCCG CCCCCAAAAA ACCGCCGCGC CCCGACCTCA CCGACATCAA GGCGATCGGC
GATTTCCTGA AGGAACAGTG GGGCAACAGC GTCGGGGTGA CGAAGGCGAT GAACCAGTAT
CTCGCGGCGA TGTTCGGCAT CGGCGGCGAC GGGCTGGCCA CGCCCTTTGC GGGCGTGCCG
CGCACCAGCT TCAACCGCAA CATCACCGGC GCGCGGCGCT TCGTCGCGCA AAGCTGGTCG
CTGGAACGGG TCAGGGCGAT GGGCAAGGCT TATGACGGGA CGATCAACGA CGCGGTGCTC
GGCATGTGCG CGGGCGCGAT GCGCAAATAT CTGCAATCGC TGAACGAACT GCCCGACAAG
CCCTTGAAAG CCATGGCGCC GGTGTCGATC CGGCCCAAGG ACGACATCGA TTCGGGCAAT
TCGGTCGCGT CGGTGACCGC GAACCTTGCG ACGCATATCG ACGATCCGGC GACGCGCATG
GCGATGATCC AGGAATCGAT GAACTCGGCG AAGGCGCAGC TTCGCGCGAT GACCGCGCAG
CAAATACGGC TCTATACCGC GATCACCAGC TTCCCGATGA TGCTCACCGC GCTCACGCGC
ACCGCCGACA AGTTTCCGGC CTATTCGGTG ACCATTTCCA ACGTCCCCGG CCCGCGCGAG
CAGATGTACT GGAACGGCGC GCGACTCGAC GGCATGTATC CCGCAAGCAT CCCGGTCGAC
GGCATGGCGA TGAACATCAC GCAGGTGTCG AACTTCAGGA ATATCGACTT CGGCATCACC
GCCTGCCGCC GCAGCGTCCC GCACGCGCAG CGGATGATCG ACTATCTGGA AGACTCTCTG
GTCGAACTCG AAACGGCAGC AGGCATCAAG AAGGCGAAAT AG
|
|---|
| Protein sequence | MRLMPVTDAM FLWGESREMP MHIGGINLYT LPDGVDETEW LNEQLTLLRQ SEGLRRPFSE
VLKLTPFGQY GPIRLVPDRD IDMHYHVRAA ALPKPGRYRE MFELASRLHS GLLDRTRPLW
EITLISGLPN RQIATFKKVH HALMDGAASI HFYNSMLSPD PDERRTASPL SVEAYEAYKR
SFPAPKKPPR PDLTDIKAIG DFLKEQWGNS VGVTKAMNQY LAAMFGIGGD GLATPFAGVP
RTSFNRNITG ARRFVAQSWS LERVRAMGKA YDGTINDAVL GMCAGAMRKY LQSLNELPDK
PLKAMAPVSI RPKDDIDSGN SVASVTANLA THIDDPATRM AMIQESMNSA KAQLRAMTAQ
QIRLYTAITS FPMMLTALTR TADKFPAYSV TISNVPGPRE QMYWNGARLD GMYPASIPVD
GMAMNITQVS NFRNIDFGIT ACRRSVPHAQ RMIDYLEDSL VELETAAGIK KAK
|
|---|
| |