| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0516 |
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| Symbol | |
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| ID | 4081406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 532864 |
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| End bp | 535332 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638008874 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_615570 |
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| Protein GI | 103486009 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.355693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAGC TGCCGCTGCC GATCGACGCC GTGCTGCCCG ACATCATGGC GGCGCTGGTG
CTGAAGCCCA ATGCCGTCGT AGTGGCGCCG CCGGGCGCGG GGAAGACCAC GCGCGTCGCG
CCGGCGATCC TCGATCAGCC CTGGTGCAAG GGGGCGGTAT GGCTGCTCTC GCCGCGGCGG
CTCGCGGCGC GCGGTGCGGC CGAACGCATA TCGGAGGAGA TGGGCGAGGC GGTCGGCGGC
GCGGTTGGCT ATGCGACGCG GCTCGACAGC AAGCAGTCGG CGACGACGCG GCTGCTGGTG
ATGACCCCCG GCCTGTTCCG CAACCGCATC CTTGCCGATC CCGAACTTCG CGGCGTGTCG
GCGGTGCTGT TCGACGAAGT CCACGAGCGC AGCCTTGACG GCGATTTCGC GCTCGCGCTG
GCAATCGACG CGCAGCAGGG GCTGCGCGAC GATCTGCGCC TCGTCGCCAT GTCGGCGACG
CTCGACGGCG CGCGGTTCGG CGCGCTGCTC GGCGATGCGC CGGTGGTGAA GAGCGAAGGC
AAGATTTTTC CGCTCGATCT CCGCCACATC GGCCGCCGCG CCGAGGATCG GCTCGAAGCG
TCGGTGCTGG CGGCGGTGCG GCAGGCGATG GCGGACGAGG CAGACGGCGA CATGCTCGCC
TTCCTGCCCG GCGCCGCTGA CATCGAGCGC GCGGCGAACG CAGTGGACGA GGCACGCCTG
CCGCTCGCTG TCCACCGGCT GCACGGACAG ATCGACCCCG CGCTCCAGCG AAAGGCGCTC
GTCCGCGATC CCGAGGGGCG GCGCAAGCTG ATCCTCGCGA CGAGCATCGC CGAAACCAGC
CTGACGATCG ACGGCGTGCG TATCGTCATC GACGCTGGCC TCTCGCGCCG CCCGCGCTTC
GACAAGGCCG CGGGGATATC GCGCCTCGTC ACCGAACGCG CGAGTCAGGC GTCGGCGACG
CAGCGCGCGG GGCGCGCGGC GCGGCAGGGG CCAGGGGCGG CTTATCGCTT GTGGGAAGCC
GCGGCGACCG CGGGAATGCC GCCCTTCGAC CCGCCCGAAA TCCACGAGAG CGACCTGATG
CCCGTCGTGC TCGACTGCGC GAGCTGGGGC ATCATTGACC CGCGCCAATT GGGCTGGCTC
GATCCTCCGT CGCCTGCCGC GGTGGCCGAA GCGAAGACGC GGCTGCAAGC GATCGGGGCG
CTCGGCGAAG ACGGGCGGAT CACCGCGCAT GGCAAGGCGC TCGCCGCGAT CCCGCTGCCC
GTGCCGCTCG CGCACATGCT GCTCGACGCG GCGCGCGCGG GGGAAGGCGA GTTGGCGGGG
CGCCTGGCGG TGCTGCTCAC CGAACCGGGG CTCGGAGGGC GCGGCGTCGA TGTCGAGGCG
CGGCTGGCGC GCTGGCGCGC GCAGCGCGAC GAGCGGTCCG GAGGGGCGTT TCGCCTCGCA
CGGCGGCTTT CGGGCATCGC GGAAAAGCTG GCGGCGGGGG CAGGCGAAGC CGCGCCGCGC
TCGCTCGGCG GCTGGATAGC GACCGCCTGG CCCGATCGCG TGGCGCGTCG GCGCGCGGGT
CAGCGCGGTG AGTATCTGAG CGTCGGAGGG CGGGCCTATC GTCTCGATCC GGTCGATCCG
CTGGCCGGGA GCGAATGGCT GGCAATCGCC GATGCGCAGG GACACGCCGC GGGCGTGCGC
ATCCTCGCCG CCGCGGCGAT TGATGCGGTC GAGGTCGAAA CCTTGTTCGC GGACCATATC
GTCGTCCATT CGGCAAGCCG CTACGACAGC GCGAACGACC GCGTCGATCA CCGGCGCGAG
CGGCGGCTCG GCGCGATTGC GCTGACGAGC GGACCGGCGC CGCGCGGGGA CACGGCCGCA
GACGATATCG CGGTGCGCAT GGCGGCGGTG CGCGACAAGG GTCTGGGTCT TATCGGCTGG
GGTCCGGCGG CGCAGGCACT GCGCCAACGC GCCTCCTTTG CGGGGCTCGA CGCGCTGTCG
ACCAATGCGC TTGGCGACAA CCTCGAAATC TGGCTCGAGC CCTTGCTCGC CGACTGCCGC
GGGTTGCGCG ACATCGGCGA CCGCAGGCTC GCCGATGCGC TGATGGCGAT GCTCGACTGG
CCGGCGCGAC AGTTGCTCGA AAGACATGCG CCCGCCGATT ACGTGACCCC GGCGGGCAGT
CGGCATCCGA TCGACTATGG CGCCGACGGC GGCCCGACGG TCAGCGTCCG GGTGCAGGAG
ATGTTCGGCC AGTCGCGTCA CCCGGTCGTC GGCGATCCGC CGGTGCCGCT GATCCTCGCG
CTGACGTCGC CCGCGCATCG GCCGATCCAG ACGACGCGCG ATCTGGCGTC CTTCTGGGCG
GGCAGCTGGC ACGATGTCGC GCGCGAAATG CGCGGCCGTT ATCCAAAGCA TAGCTGGCCA
GACGATCCCG CAGGCGCCCG TCCGACGCTG ATGACCAAGG CGGCGCAGGC GCGGCGCGAG
GGTCAATAG
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| Protein sequence | MTQLPLPIDA VLPDIMAALV LKPNAVVVAP PGAGKTTRVA PAILDQPWCK GAVWLLSPRR
LAARGAAERI SEEMGEAVGG AVGYATRLDS KQSATTRLLV MTPGLFRNRI LADPELRGVS
AVLFDEVHER SLDGDFALAL AIDAQQGLRD DLRLVAMSAT LDGARFGALL GDAPVVKSEG
KIFPLDLRHI GRRAEDRLEA SVLAAVRQAM ADEADGDMLA FLPGAADIER AANAVDEARL
PLAVHRLHGQ IDPALQRKAL VRDPEGRRKL ILATSIAETS LTIDGVRIVI DAGLSRRPRF
DKAAGISRLV TERASQASAT QRAGRAARQG PGAAYRLWEA AATAGMPPFD PPEIHESDLM
PVVLDCASWG IIDPRQLGWL DPPSPAAVAE AKTRLQAIGA LGEDGRITAH GKALAAIPLP
VPLAHMLLDA ARAGEGELAG RLAVLLTEPG LGGRGVDVEA RLARWRAQRD ERSGGAFRLA
RRLSGIAEKL AAGAGEAAPR SLGGWIATAW PDRVARRRAG QRGEYLSVGG RAYRLDPVDP
LAGSEWLAIA DAQGHAAGVR ILAAAAIDAV EVETLFADHI VVHSASRYDS ANDRVDHRRE
RRLGAIALTS GPAPRGDTAA DDIAVRMAAV RDKGLGLIGW GPAAQALRQR ASFAGLDALS
TNALGDNLEI WLEPLLADCR GLRDIGDRRL ADALMAMLDW PARQLLERHA PADYVTPAGS
RHPIDYGADG GPTVSVRVQE MFGQSRHPVV GDPPVPLILA LTSPAHRPIQ TTRDLASFWA
GSWHDVAREM RGRYPKHSWP DDPAGARPTL MTKAAQARRE GQ
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