Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0512 |
Symbol | |
ID | 4081402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 530372 |
End bp | 531061 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638008870 |
Product | glutathione S-transferase-like protein |
Protein accession | YP_615566 |
Protein GI | 103486005 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.624431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.610727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCATC CGATCTTCGC CCGCTGGCCC GCGAAATACC CCGACCGGCT CCAGCTTTTC TCGGCTCCCA CGCCCAATGG GGTGAAGGCG GGAATCATGC TGGAGGAGAC GGGCCTTTCC TATGAGCCGC ACCGCATCGA CATCATGGCG AATGAAAGCC ATGACCCCGC CTTTCTCGCG CTCAACCCCA ATGGCAAGAT TCCCGCGATC TATGACCCTC AGGGGCCGGG CGGCAAGCCG CTCGCGCTGT TCGAATCGGG CGCGATCCTG ATCTATCTTG CGGACAAGAG CGGGCAGTTT CTTTCGCCCG ATCCGGCGGC GCGTTACGAA ACGATCCAGT GGGTGATGTG GCAGATGGGC GGCGTCGGGC CGATGTTCGG CCAGCTCGGC TTTTTCCACA AATTCGCGGG CCGCGAATAT GCGGACAAGC GGCCCCGCGA CCGCTACGCC GCCGAATCGG CGCGGCTGCT CGGCGTGCTC GACGATCGGC TTGCGGCGCG GCCATGGGTG ATGGGCGCGG ATTACAGCAT CGCCGACATC TCGCTGCTCG GCTGGGTGCG CAATCTGATC GGCTTTTACG ACGCCGCCGA AATCGTCGGG TTCGAGCGTT TCGCGCGTGT GCAGCGCTGG CTGGACGCCG GACTGGCGCG GCCGGGCGTG CAGCGCGGGC TGGAGGTTAC GGCGGGTTGA
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Protein sequence | MDHPIFARWP AKYPDRLQLF SAPTPNGVKA GIMLEETGLS YEPHRIDIMA NESHDPAFLA LNPNGKIPAI YDPQGPGGKP LALFESGAIL IYLADKSGQF LSPDPAARYE TIQWVMWQMG GVGPMFGQLG FFHKFAGREY ADKRPRDRYA AESARLLGVL DDRLAARPWV MGADYSIADI SLLGWVRNLI GFYDAAEIVG FERFARVQRW LDAGLARPGV QRGLEVTAG
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