Gene Sala_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0512 
Symbol 
ID4081402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp530372 
End bp531061 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID638008870 
Productglutathione S-transferase-like protein 
Protein accessionYP_615566 
Protein GI103486005 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.624431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.610727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCATC CGATCTTCGC CCGCTGGCCC GCGAAATACC CCGACCGGCT CCAGCTTTTC 
TCGGCTCCCA CGCCCAATGG GGTGAAGGCG GGAATCATGC TGGAGGAGAC GGGCCTTTCC
TATGAGCCGC ACCGCATCGA CATCATGGCG AATGAAAGCC ATGACCCCGC CTTTCTCGCG
CTCAACCCCA ATGGCAAGAT TCCCGCGATC TATGACCCTC AGGGGCCGGG CGGCAAGCCG
CTCGCGCTGT TCGAATCGGG CGCGATCCTG ATCTATCTTG CGGACAAGAG CGGGCAGTTT
CTTTCGCCCG ATCCGGCGGC GCGTTACGAA ACGATCCAGT GGGTGATGTG GCAGATGGGC
GGCGTCGGGC CGATGTTCGG CCAGCTCGGC TTTTTCCACA AATTCGCGGG CCGCGAATAT
GCGGACAAGC GGCCCCGCGA CCGCTACGCC GCCGAATCGG CGCGGCTGCT CGGCGTGCTC
GACGATCGGC TTGCGGCGCG GCCATGGGTG ATGGGCGCGG ATTACAGCAT CGCCGACATC
TCGCTGCTCG GCTGGGTGCG CAATCTGATC GGCTTTTACG ACGCCGCCGA AATCGTCGGG
TTCGAGCGTT TCGCGCGTGT GCAGCGCTGG CTGGACGCCG GACTGGCGCG GCCGGGCGTG
CAGCGCGGGC TGGAGGTTAC GGCGGGTTGA
 
Protein sequence
MDHPIFARWP AKYPDRLQLF SAPTPNGVKA GIMLEETGLS YEPHRIDIMA NESHDPAFLA 
LNPNGKIPAI YDPQGPGGKP LALFESGAIL IYLADKSGQF LSPDPAARYE TIQWVMWQMG
GVGPMFGQLG FFHKFAGREY ADKRPRDRYA AESARLLGVL DDRLAARPWV MGADYSIADI
SLLGWVRNLI GFYDAAEIVG FERFARVQRW LDAGLARPGV QRGLEVTAG